RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ITGA1P56199 1179 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 UBE2IP63279 158 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SELENOWP63302 87 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ADARB1P78563 741 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PPP2R2BQ00005 443 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CDK6Q00534 326 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 GAB1Q13480 694 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PLCL1Q15111 1095 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ELOCQ15369 112 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CEBPEQ15744 281 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MPEG1Q2M385 716 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 LRRC23Q53EV4 343 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 NDUFAF5Q5TEU4 345 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PRAMEF8Q5VWM4 474 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PRAMEF7Q5VXH5 474 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SAXO2Q658L1 398 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 OR2T5Q6IEZ7 315 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ANKRD26P1Q6NSI1 321 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ENPP6Q6UWR7 440 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SLC36A4Q6YBV0 504 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 USP51Q70EK9 711 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ABHD13Q7L211 337 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF551Q7Z340 670 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 UBE3DQ7Z6J8 389 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ASPGQ86U10 573 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 STK32CQ86UX6 486 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 NRROSQ86YC3 692 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ARMC8Q8IUR7 673 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ZDHHC21Q8IVQ6 265 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CLEC4FQ8N1N0 589 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF555Q8NEP9 628 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 OR2T29Q8NH02 315 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MAGEE2Q8TD90 523 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 TM4SF19Q96DZ7 209 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 KLHDC7BQ96G42 594 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 RMND5BQ96G75 393 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SERINC2Q96SA4 455 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 EPYCQ99645 322 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MYOCQ99972 504 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SPATA5L1Q9BVQ7 753 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 TMEM168Q9H0V1 697 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 XKR8Q9H6D3 395 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 C6orf106Q9H6K1 298 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 LMAN1LQ9HAT1 526 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PRDM7Q9NQW5 492 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 THSD1Q9NS62 852 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 DDX18Q9NVP1 670 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 UBAP1Q9NZ09 502 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CPNE7Q9UBL6 633 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ENOPH1Q9UHY7 261 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 NDRG2Q9UN36 371 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PCDHGB3Q9Y5G1 929 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 HSPE1-MOB4S4R3N1 261 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 C2orf16Q68DN1 1984 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 A0A087WXM4 84 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 BLACEA4D250 179 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM64A6NGJ6 449 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 MYO1GB0I1T2 1018 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 H0Y8X5 98 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 H3BNH8 94 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 PDLIM1O00151 329 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 DLGAP1O14490 977 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 HAT1O14929 419 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLC16A6O15403 523 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ERI3O43414 337 aaKnown RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ASNA1O43681 348 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TMPRSS11DO60235 418 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 NDUFS2O75306 463 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SH3BGRLO75368 114 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SOX30O94993 753 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 AGR2O95994 175 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 GBAP04062 536 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 THEGLP0DJG4 465 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 CTSEP14091 401 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 AK4P27144 223 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 PPP2R1BP30154 601 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TLX1P31314 330 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TTKP33981 857 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 DCTP40126 519 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 BUD31P41223 144 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 GATA4P43694 442 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 MAPK10P53779 464 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 PCBP3P57721 371 aaKnown RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 DSTNP60981 165 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 RAC1P63000 192 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SKP1P63208 163 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 CYP4F2P78329 520 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 MC1RQ01726 317 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 EEF1A2Q05639 463 aaKnown RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLAMF1Q13291 335 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLC14A1Q13336 389 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TOP3AQ13472 1001 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SCARB2Q14108 478 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FZD2Q14332 565 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SPDYE7PQ495Y7 208 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 LIN52Q52LA3 116 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 IFI44LQ53G44 452 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms