RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KLHL8Q9P2G9 620 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 FAF1Q9UNN5 650 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-208ENST00000553278 NAALAD2Q9Y3Q0 740 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 SPACA6W5XKT8 324 aa5.15□□□□□ -1.59
SCFD1-208ENST00000553278 FGD5Q6ZNL6 1462 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 NKX6-3A6NJ46 265 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 H0Y8G0 127 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 P2RX6O15547 441 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 BUB1O43683 1085 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PRKNO60260 465 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 KLHL41O60662 606 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SDC3O75056 442 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SURF6O75683 361 aaKnown RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 NDUFA7O95182 113 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 IGHV4-38-2P0DP08 117 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 CEBPBP17676 345 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 AADACP22760 399 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 MATKP42679 507 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 BEX3Q00994 111 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SRSF9Q13242 221 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 NFATC2Q13469 925 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PDK3Q15120 406 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 C3AR1Q16581 482 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 CLPPQ16740 277 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 DCAF4L1Q3SXM0 396 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 KCTD21Q4G0X4 260 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 DDI2Q5TDH0 399 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 C1orf189Q5VU69 101 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 ASPHD2Q6ICH7 369 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 TMEM207Q6UWW9 146 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PAQR9Q6ZVX9 377 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 CENPUQ71F23 418 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 LUZP1Q86V48 1076 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 CBWD2Q8IUF1 395 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 ZDHHC17Q8IUH5 632 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PARP8Q8N3A8 854 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 GPR148Q8TDV2 347 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SECTM1Q8WVN6 248 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 CASP10Q92851 521 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 ST6GAL2Q96JF0 529 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 LURAP1Q96LR2 239 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 RAB40CQ96S21 281 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SECISBP2Q96T21 854 aaKnown RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 RBM24Q9BX46 236 aaKnown RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 RPAP3Q9H6T3 665 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 MIOXQ9UGB7 285 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PTBP2Q9UKA9 531 aaKnown RBP5.14□□□□□ -1.59
SCFD1-208ENST00000553278 KIF7Q2M1P5 1343 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SYNRGQ9UMZ2 1314 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 PTCH1Q13635 1447 aa5.14□□□□□ -1.59
SCFD1-208ENST00000553278 SMCHD1A6NHR9 2005 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 A0A087WUV0 522 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 A0A087WZ39 114 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 XKRY2A2RUG3 117 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 TCP10L2B9ZVM9 353 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 B4GAT1O43505 415 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 MBD3O95983 291 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 LYNP07948 512 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 FRMD6-AS1P0C7T7 363 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 MBL2P11226 248 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 GLRA1P23415 457 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 PAX7P23759 505 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 CCNCP24863 283 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 TRIM23P36406 574 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 NR4A2P43354 598 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ACADVLP49748 655 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 C21orf58P58505 322 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 KRTAP10-2P60368 255 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 HERVK_113P63132 956 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ERVK-8P63133 956 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 CCNA1P78396 465 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 CBX1P83916 185 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 TNFRSF17Q02223 184 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 CUL2Q13617 745 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF425Q6IV72 752 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ARHGAP11AQ6P4F7 1023 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 SLC39A4Q6P5W5 647 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF549Q6P9A3 640 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 BLOC1S2Q6QNY1 142 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ASRGL1Q7L266 308 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 PIGZQ86VD9 579 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 CACUL1Q86Y37 369 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 IQCF1Q8N6M8 205 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ADAD2Q8NCV1 583 aaKnown RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF397Q8NF99 534 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 WDR36Q8NI36 951 aaKnown RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 RDH11Q8TC12 318 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 PCED1BQ96HM7 432 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 COG3Q96JB2 828 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 RAB11FIP5Q9BXF6 653 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ERVK-6Q9BXR3 956 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 PITPNM3Q9BZ71 974 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 THAP2Q9H0W7 228 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 C3orf14Q9HBI5 128 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 B9D1Q9UPM9 204 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 MRPS33Q9Y291 106 aaKnown RBP5.13□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF175Q9Y473 711 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 SELENOKQ9Y6D0 94 aa5.13□□□□□ -1.59
SCFD1-208ENST00000553278 SPATA31D1Q6ZQQ2 1576 aa5.12□□□□□ -1.59
SCFD1-208ENST00000553278 WDR91A4D1P6 747 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms