RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 TANKQ92844 425 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 TM4SF18Q96CE8 201 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-226ENST00000553011 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 AGAP4Q96P64 663 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 EBPLQ9BY08 206 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 WDR41Q9HAD4 459 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 ADAP2Q9NPF8 381 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 NKIRAS1Q9NYS0 192 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 PTGFRNQ9P2B2 879 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
PTCH1-226ENST00000553011 A0A1W2PS29 197 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 RSL1D1O76021 490 aaKnown RBP13.19□□□□□ -0.3
PTCH1-226ENST00000553011 CHEK2O96017 543 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 ALPPP05187 535 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 LINC00032P0C843 101 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 TIA1P31483 386 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTCH1-226ENST00000553011 SOX11P35716 441 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 SLC18A1P54219 525 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
PTCH1-226ENST00000553011 SERTAD2Q14140 314 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 ELAVL1Q15717 326 aaKnown RBP13.19□□□□□ -0.3
PTCH1-226ENST00000553011 OR52E8Q6IFG1 317 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 JMJD6Q6NYC1 403 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-226ENST00000553011 LINC00696Q6ZRV3 163 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 Q6ZSR9 355 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 OR2T11Q8NH01 316 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 DNAJB14Q8TBM8 379 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 KCNK13Q9HB14 408 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 MMP25Q9NPA2 562 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
PTCH1-226ENST00000553011 NUP214P35658 2090 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 GNG14A0A1W2PPG7 69 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 A8MUI8 341 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 SLC28A1O00337 649 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 PIP5K1BO14986 540 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 KLHL41O60662 606 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 GPR75O95800 540 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 UQCRHP07919 91 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 GRK2P25098 689 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 SLC1A6P48664 564 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 CD97P48960 835 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 TAS2R50P59544 299 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 TRA2BP62995 288 aaKnown RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 AP2B1P63010 937 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 BST1Q10588 318 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 STX3Q13277 289 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 NR6A1Q15406 480 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 TERF2Q15554 542 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 CRB2Q5IJ48 1285 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 FCRLBQ6BAA4 426 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 DGAT2L6Q6ZPD8 337 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 RNF165Q6ZSG1 346 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 DDIASQ8IXT1 998 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 RBMXL3Q8N7X1 1067 aaKnown RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 B3GNT7Q8NFL0 401 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 ELP5Q8TE02 316 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 DOK4Q8TEW6 326 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 PTPMT1Q8WUK0 201 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 NCLNQ969V3 563 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 PPWD1Q96BP3 646 aaKnown RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 SORT1Q99523 831 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 HEY2Q9UBP5 337 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 DLGAP4Q9Y2H0 992 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 POLR3HQ9Y535 204 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-226ENST00000553011 BSNQ9UPA5 3926 aa13.18□□□□□ -0.3
PTCH1-226ENST00000553011 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 C1orf226A1L170 272 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 SYNDIG1LA6NDD5 238 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 RGS14O43566 566 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 DPM1O60762 260 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 SEC22BO75396 215 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 IL3P08700 152 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 ANXA4P09525 319 aaPredicted RBP13.17□□□□□ -0.3
PTCH1-226ENST00000553011 ALOX15P16050 662 aaPredicted RBP13.17□□□□□ -0.3
PTCH1-226ENST00000553011 TNNI3P19429 210 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 PRPH2P23942 346 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 STT3AP46977 705 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 ALDH9A1P49189 494 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 GPR143P51810 404 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 MFAP5Q13361 173 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 KIAA0040Q15053 153 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 ZNF750Q32MQ0 723 aa13.17□□□□□ -0.3
PTCH1-226ENST00000553011 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms