RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 A0A1W2PQL4 384 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ELOVL7A1L3X0 281 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C5orf52A6NGY3 159 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MYO1GB0I1T2 1018 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C9JVG2 144 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 D6RAR5 112 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 H0Y8X5 98 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 H7C2Y5 167 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 UBE2CO00762 179 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR171O14626 319 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PPEF2O14830 753 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 DCLK1O15075 740 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SCAMP1O15126 338 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PPM1DO15297 605 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PSMD3O43242 534 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SMAD6O43541 496 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SUSD5O60279 629 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HPGDSO60760 199 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ATP6AP2O75787 350 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 RAD17O75943 681 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HPP00738 406 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 RLN2P04090 185 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 IL6P05231 212 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 RNASE1P07998 156 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HIST1H2AGP0C0S8 130 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TSPAN19P0C672 248 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 IL2RBP14784 551 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PAX1P15863 534 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MUC1P15941 1255 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LAG3P18627 525 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TSPAN8P19075 237 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TNNI1P19237 187 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HIST1H2ADP20671 130 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 DDX6P26196 483 aaKnown RBP eCLIP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PAX6P26367 422 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 POU1F1P28069 291 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PTPN6P29350 595 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MMP12P39900 470 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PBX3P40426 434 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 NR0B1P51843 470 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PGGT1BP53609 377 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PRMT2P55345 433 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SPCS3P61009 180 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PPP3R1P63098 170 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TIAL1Q01085 375 aaKnown RBP eCLIP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ZP2Q05996 745 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TCP10Q12799 353 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ECH1Q13011 328 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SERTAD2Q14140 314 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ERV3-1Q14264 604 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR176Q14439 515 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF460Q14592 562 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 UBXN2BQ14CS0 331 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MINDY4Q4G0A6 757 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SYTL3Q4VX76 610 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LRIF1Q5T3J3 769 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HECTD3Q5T447 861 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 CERCAMQ5T4B2 595 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HIST2H2AA3Q6FI13 130 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 KIAA0930Q6ICG6 404 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 FRMPD2BQ6IN97 320 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC30A6Q6NXT4 461 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC23A3Q6PIS1 610 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 CD200R1LQ6Q8B3 271 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LCLAT1Q6UWP7 414 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TMEM207Q6UWW9 146 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM131AQ6UXB0 335 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 WASH2PQ6VEQ5 465 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C3P1Q6ZMU1 363 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF730Q6ZMV8 503 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM92BQ6ZTR7 304 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 CBLL1Q75N03 491 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LRRC8DQ7L1W4 858 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 EIF3MQ7L2H7 374 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TRMT11Q7Z4G4 463 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TSEN54Q7Z6J9 526 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LAS2Q8IYD9 372 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C12orf29Q8N999 325 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LINC00116Q8NCU8 138 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 AGBL5Q8NDL9 886 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 OR4A15Q8NGL6 344 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 OR4C15Q8NGM1 316 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 RHEBL1Q8TAI7 183 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 CEP76Q8TAP6 659 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 FBXO30Q8TB52 745 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SCARB1Q8WTV0 552 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ASB12Q8WXK4 309 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PMM1Q92871 262 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 USP7Q93009 1102 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SIPA1Q96FS4 1042 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ZDHHC12Q96GR4 267 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ATXN7L3BQ96GX2 97 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SENP5Q96HI0 755 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HIST1H2AHQ96KK5 128 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 CXorf58Q96LI9 332 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms