RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TMEM198Q66K66 360 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 SLC48A1Q6P1K1 146 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 INO80CQ6PI98 192 aaPredicted RBP12.23□□□□□ -0.45
RAB5C-206ENST00000550406 DGAT2L6Q6ZPD8 337 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 OR11G2Q8NGC1 345 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 ALOXE3Q9BYJ1 711 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 NPHS2Q9NP85 383 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 MRPS33Q9Y291 106 aaKnown RBP12.23□□□□□ -0.45
RAB5C-206ENST00000550406 WBP11Q9Y2W2 641 aaKnown RBP12.23□□□□□ -0.45
RAB5C-206ENST00000550406 SPACA6W5XKT8 324 aa12.23□□□□□ -0.45
RAB5C-206ENST00000550406 NUP214P35658 2090 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 BLACEA4D250 179 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 CLDN4O14493 209 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 AKAP10O43572 662 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 GUCY1B2O75343 617 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 LRATO95237 230 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 GPR75O95800 540 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 PRPS2P11908 318 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 COX6A1P12074 109 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 DRD2P14416 443 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 LSP1P33241 339 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 GSTM5P46439 218 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 EEF1A2Q05639 463 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 SLC13A2Q13183 592 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 ATP1A4Q13733 1029 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 ZNF385BQ569K4 471 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 FAM180BQ6P0A1 224 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 CPEB2Q7Z5Q1 589 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 MRGPREQ86SM8 312 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 RAB43Q86YS6 212 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 RIMKLAQ8IXN7 391 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 TMEM132CQ8N3T6 1108 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 CEP70Q8NHQ1 597 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 CDC26Q8NHZ8 85 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 SNRNP27Q8WVK2 155 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 GFM2Q969S9 779 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 ZNF681Q96N22 645 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 CCDC28BQ9BUN5 200 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 NOP53Q9NZM5 478 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 DCTN4Q9UJW0 460 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 EIF3LQ9Y262 564 aaKnown RBP12.22□□□□□ -0.45
RAB5C-206ENST00000550406 GPR45Q9Y5Y3 372 aa12.22□□□□□ -0.45
RAB5C-206ENST00000550406 MAP1BP46821 2468 aaKnown RBP12.21□□□□□ -0.45
RAB5C-206ENST00000550406 PTPRQQ9UMZ3 2332 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 IGHV1-45A0A0A0MS14 117 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 GABRR3A8MPY1 467 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 A8MUA0 341 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 DDCP20711 480 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 MAPK1P28482 360 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 SOX18P35713 384 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 ALDH9A1P49189 494 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 OR4D2P58180 307 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 GNGT1P63211 74 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-206ENST00000550406 PDE7AQ13946 482 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 HEPACAMQ14CZ8 416 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 MPEG1Q2M385 716 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 NXNQ6DKJ4 435 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 IKBIPQ70UQ0 350 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 SPATA19Q7Z5L4 167 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 TICAM1Q8IUC6 712 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 KRTCAP2Q8N6L1 136 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 NFAM1Q8NET5 270 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-206ENST00000550406 DOK4Q8TEW6 326 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 METTL21AQ8WXB1 218 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 STON2Q8WXE9 905 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 NACC2Q96BF6 587 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 PPWD1Q96BP3 646 aaKnown RBP12.21□□□□□ -0.45
RAB5C-206ENST00000550406 CNRIP1Q96F85 164 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-206ENST00000550406 MARK4Q96L34 752 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 TEX37Q96LM6 180 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 FAIM2Q9BWQ8 316 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 ZNF700Q9H0M5 742 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 WDR41Q9HAD4 459 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 TAS2R7Q9NYW3 318 aa12.21□□□□□ -0.45
RAB5C-206ENST00000550406 TBX19O60806 448 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 SEC24DO94855 1032 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 CELA2AP08217 269 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 DRD4P21917 467 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 PIK3R1P27986 724 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 IL12AP29459 219 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 ASMTP46597 345 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 ZFP36L2P47974 494 aaKnown RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 GPR143P51810 404 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 XKP51811 444 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 UCNP55089 124 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 CLDN8P56748 225 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 C21orf58P58505 322 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 Q0VFX4 171 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 STX4Q12846 297 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 CEBPEQ15744 281 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms