RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 LIPJQ5W064 366 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 ZNF790Q6PG37 636 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 ERASQ7Z444 233 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 AMZ2Q86W34 360 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.04□□□□□ -1.6
HCFC2-204ENST00000550335 SAMD14Q8IZD0 417 aaPredicted RBP5.04□□□□□ -1.6
HCFC2-204ENST00000550335 RNF148Q8N7C7 305 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 ADAD2Q8NCV1 583 aaKnown RBP5.04□□□□□ -1.6
HCFC2-204ENST00000550335 IPMKQ8NFU5 416 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 RPLP0P6Q8NHW5 317 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 CASP10Q92851 521 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 HIST1H2ACQ93077 130 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 DEFB118Q96PH6 123 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 MYCBPQ99417 103 aaPredicted RBP5.04□□□□□ -1.6
HCFC2-204ENST00000550335 S1PR3Q99500 378 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 WACQ9BTA9 647 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 TEX13BQ9BXU2 312 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 WWP1Q9H0M0 922 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 ACTR8Q9H981 624 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 VAT1LQ9HCJ6 419 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 MED17Q9NVC6 651 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 ANGPTL3Q9Y5C1 460 aa5.04□□□□□ -1.6
HCFC2-204ENST00000550335 CDC42BPBQ9Y5S2 1711 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 ABCC1P33527 1531 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 NEDD4P46934 1319 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 RNF123Q5XPI4 1314 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 MAGEC1O60732 1142 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CSO75390 466 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 KRT33AO76009 404 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 EML2O95834 649 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CT45A8P0DMV1 189 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CT45A9P0DMV2 189 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 NUCB2P80303 420 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 NME3Q13232 169 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 MSLNQ13421 630 aaPredicted RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CT45A2Q5DJT8 189 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 IL23RQ5VWK5 629 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CDC42EP5Q6NZY7 148 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 ABRAXAS1Q6UWZ7 409 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 ARMCX2Q7L311 632 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 YRDCQ86U90 279 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 CUZD1Q86UP6 607 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 MISPQ8IVT2 679 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 RFLNBQ8N5W9 214 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 RELL2Q8NC24 303 aaPredicted RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 OR4D10Q8NGI6 311 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 U2AF1L4Q8WU68 220 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 THRSPQ92748 146 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 VOPP1Q96AW1 172 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 NUSAP1Q9BXS6 441 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 TDRD1Q9BXT4 1180 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 PITPNM3Q9BZ71 974 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 ZNF624Q9P2J8 865 aaPredicted RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 DIMT1Q9UNQ2 313 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 MGAT4BQ9UQ53 548 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.03□□□□□ -1.6
HCFC2-204ENST00000550335 RTEL1-TNFRSF6BF6WH68 1400 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 C9orf84Q5VXU9 1444 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 YEATS2Q9ULM3 1422 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 TIAM1Q13009 1591 aa5.03□□□□□ -1.6
HCFC2-204ENST00000550335 AGLP35573 1532 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ARHGEF12Q9NZN5 1544 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ADAMTSL3P82987 1691 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 LRRC9Q6ZRR7 1453 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 IGHV4-4A0A075B6R2 117 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 A0A087WZY1 265 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 hCG_38984A0A1B0GV85 526 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 FAM172BPA6NC97 362 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 MSGN1A6NI15 193 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SHISA7A6NL88 538 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SRRM4A7MD48 611 aaKnown RBP5.02□□□□□ -1.61
HCFC2-204ENST00000550335 LMO7DNF2Z398 122 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 F8WDY8 70 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 LGALS8O00214 317 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 P2RX6O15547 441 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ANXA9O76027 345 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 RPLP0P05388 317 aaKnown RBP5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SERPINF2P08697 491 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 HSPA5P11021 654 aaKnown RBP5.02□□□□□ -1.61
HCFC2-204ENST00000550335 PPP2R1AP30153 589 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 PRDX2P32119 198 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 MDH1P40925 334 aaKnown RBP5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ID1P41134 155 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ALDH3B1P43353 468 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 NUMBP49757 651 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 PAX9P55771 341 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 BACE1P56817 501 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 OVGP1Q12889 678 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SNX1Q13596 522 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 OR1C1Q15619 314 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SPANXN4Q5MJ08 99 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 SULT1C3Q6IMI6 304 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ARSKQ6UWY0 536 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 ZNF730Q6ZMV8 503 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 MEX3BQ6ZN04 569 aaKnown RBP5.02□□□□□ -1.61
HCFC2-204ENST00000550335 CDHR3Q6ZTQ4 885 aa5.02□□□□□ -1.61
HCFC2-204ENST00000550335 Q6ZVQ6 151 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms