RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 C16orf47Q6ZP98 133 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 RTL4Q6ZR62 310 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 GK5Q6ZS86 529 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 CLNKQ7Z7G1 428 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 ANKMY2Q8IV38 441 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 KLHL7Q8IXQ5 586 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 FAM109AQ8N4B1 249 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PDPRQ8NCN5 879 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 FBXO36Q8NEA4 188 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SRFBP1Q8NEF9 429 aaKnown RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PTPMT1Q8WUK0 201 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 TSPAN17Q96FV3 270 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 CAPZA3Q96KX2 299 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 SGCZQ96LD1 299 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 KCNC2Q96PR1 638 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 CSF3RQ99062 836 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 FAM173AQ9BQD7 235 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 ALOXE3Q9BYJ1 711 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 TTTY12Q9BZ98 90 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 PRDM7Q9NQW5 492 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 WWOXQ9NZC7 414 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 KCNN3Q9UGI6 736 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 ZNF490Q9ULM2 529 aaPredicted RBP7.06□□□□□ -1.28
NEK3-201ENST00000550331 RNF6Q9Y252 685 aa7.06□□□□□ -1.28
NEK3-201ENST00000550331 FLNAP21333 2647 aaKnown RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 A0A1B0GVC2 190 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 FAM90A27PA6NNH2 459 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 FAM166BA8MTA8 275 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 C17orf105B2RV13 164 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 FAM47E-STBD1D6RA91 191 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 NPIPA2E9PIF3 369 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 NPIPA3F8WFD2 350 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 CCDC188H7C350 402 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 WWP2O00308 870 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TAPBPO15533 448 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PRAMEF4O60810 478 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 STK16O75716 305 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PDE9AO76083 593 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 HOXD4P09016 255 aaPredicted RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 CD1DP15813 335 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 CD22P20273 847 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 ATP5A1P25705 553 aaKnown RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 ACVR2AP27037 513 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SERPINB1P30740 379 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 HSPA7P48741 367 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 NUP107P57740 925 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 RNF4P78317 190 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PMPCAQ10713 525 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 DOC2AQ14183 400 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 E2F2Q14209 437 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TBCCQ15814 346 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PDK4Q16654 411 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 MPEG1Q2M385 716 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 GXYLT1Q4G148 440 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PRAMEF9Q5VWM5 478 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 ADNP2Q6IQ32 1131 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 LRRC70Q7Z2Q7 622 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 GPSM1Q86YR5 675 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 ZBED8Q8IZ13 594 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 CLYBLQ8N0X4 340 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 RPRMLQ8N4K4 120 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TMEM251Q8N6I4 163 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SNX31Q8N9S9 440 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 BBOF1Q8ND07 529 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 MYRIPQ8NFW9 859 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 OR5M3Q8NGP4 307 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 NUBPLQ8TB37 319 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SLC2A12Q8TD20 617 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 CDKL2Q92772 493 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 UBE2E3Q969T4 207 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SCYL1Q96KG9 808 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 UBXN10Q96LJ8 280 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 F2RL3Q96RI0 385 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SMC6Q96SB8 1091 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 GPR22Q99680 433 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TBCDQ9BTW9 1192 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 MS4A8Q9BY19 250 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 OR8D2Q9GZM6 311 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 DEFB127Q9H1M4 99 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 LIN28AQ9H9Z2 209 aaKnown RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 IL1RL2Q9HB29 575 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SMYD2Q9NRG4 433 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 PNPLA3Q9NST1 481 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SACM1LQ9NTJ5 587 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TXNDC16Q9P2K2 825 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 TNFRSF10DQ9UBN6 386 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 COPS7AQ9UBW8 275 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 MTO1Q9Y2Z2 717 aaKnown RBP7.05□□□□□ -1.28
NEK3-201ENST00000550331 SPACA6W5XKT8 324 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 SCN2AQ99250 2005 aa7.05□□□□□ -1.28
NEK3-201ENST00000550331 RTTNQ86VV8 2226 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 A0A0G2JMM0 328 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 A0A1W2PPB8 328 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 A0A1W2PRS3 328 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 FAM221AA4D161 298 aa7.04□□□□□ -1.28
NEK3-201ENST00000550331 NKX2-6A6NCS4 301 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms