RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MPEG1Q2M385 716 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 SLC25A35Q3KQZ1 300 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 LYPD8Q6UX82 237 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 CAPN12Q6ZSI9 719 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 C9orf40Q8IXQ3 194 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 SENP5Q96HI0 755 aaPredicted RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 FOXC2Q99958 501 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 GPATCH1Q9BRR8 931 aaKnown RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 TBCDQ9BTW9 1192 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 EFCAB11Q9BUY7 163 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 SORBS1Q9BX66 1292 aaKnown RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 POLDIP3Q9BY77 421 aaKnown RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 ROGDIQ9GZN7 287 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 CXXC4Q9H2H0 198 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 SH2D2AQ9NP31 389 aa14.21□□□□□ -0.13
RAB5C-205ENST00000550013 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.13
RAB5C-205ENST00000550013 MPDZO75970 2070 aa14.21□□□□□ -0.14
RAB5C-205ENST00000550013 CXorf49A8MYA2 514 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SAP18O00422 153 aaKnown RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 CCNT2O60583 730 aaKnown RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 LRATO95237 230 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 CD1DP15813 335 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 HIST1H1TP22492 207 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 CPN2P22792 545 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 GMPRP36959 345 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 IGLV3-21P80748 117 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 POU4F1Q01851 419 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 IRF8Q02556 426 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 CHIT1Q13231 466 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 RIPPLY2Q5TAB7 128 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 PRAMEF20Q5VT98 475 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SLC22A10Q63ZE4 541 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SULT1C3Q6IMI6 304 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SYDE1Q6ZW31 735 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 TGIF2LYQ8IUE0 185 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 EXT2Q93063 718 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 PPWD1Q96BP3 646 aaKnown RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 SLC6A15Q9H2J7 730 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 ZNF703Q9H7S9 590 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 PROK2Q9HC23 129 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 PRM3Q9NNZ6 103 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 CD274Q9NZQ7 290 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 ST6GALNAC2Q9UJ37 374 aa14.2□□□□□ -0.14
RAB5C-205ENST00000550013 PTBP2Q9UKA9 531 aaKnown RBP14.2□□□□□ -0.14
RAB5C-205ENST00000550013 LRRC3CA6NJW4 275 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SCELO95171 688 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 TGFB1P01137 390 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 IGKV3-11P04433 115 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 PCNAP12004 261 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 COX7A2P14406 83 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SSR2P43308 183 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 KIR2DL3P43628 341 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 STT3AP46977 705 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 TRPC1P48995 793 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 KCNJ2P63252 427 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 LAPTM5Q13571 262 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 CEBPEQ15744 281 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 HIST2H2ACQ16777 129 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-205ENST00000550013 AP5B1Q2VPB7 878 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 PAGE2BQ5JRK9 111 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 CDKL4Q5MAI5 379 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 HIST2H2AA3Q6FI13 130 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SEM1Q6ZVN7 128 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 ULK2Q8IYT8 1036 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 RNF175Q8N4F7 328 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 PDPRQ8NCN5 879 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SRFBP1Q8NEF9 429 aaKnown RBP14.19□□□□□ -0.14
RAB5C-205ENST00000550013 NUBPLQ8TB37 319 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SLC22A8Q8TCC7 542 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 PAQR8Q8TEZ7 354 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 NINJ1Q92982 152 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-205ENST00000550013 DGAT2Q96PD7 388 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 OR51B5Q9H339 312 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 ZFP64Q9NPA5 681 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 NSMCE4AQ9NXX6 385 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 CRIM1Q9NZV1 1036 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 SPACA6W5XKT8 324 aa14.19□□□□□ -0.14
RAB5C-205ENST00000550013 KIAA1549Q9HCM3 1950 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 FAM221AA4D161 298 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 KDM4EB2RXH2 506 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 FAM47E-STBD1D6RA91 191 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 E7ESA3 106 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 PRKRAO75569 313 aaKnown RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 GABRA1P14867 456 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 HOXB4P17483 251 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 KLK2P20151 261 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 UQCRC1P31930 480 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 WNT3P56703 355 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 TBCCQ15814 346 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 TMEM35AQ53FP2 167 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 C18orf63Q68DL7 685 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 ZBED8Q8IZ13 594 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 LRRC25Q8N386 305 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 FBXW8Q8N3Y1 598 aa14.18□□□□□ -0.14
RAB5C-205ENST00000550013 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-205ENST00000550013 BBOF1Q8ND07 529 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms