RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 DMRT3Q9NQL9 472 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 HEATR5BQ9P2D3 2071 aa18.89■□□□□ 0.62
CTDSP2-204ENST00000548823 A0A096LPI6 279 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 A0A1W2PPV9 198 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 PEX1O43933 1283 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 PCNAP12004 261 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 TACR1P25103 407 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 RPL10P27635 214 aaKnown RBP18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 PKLRP30613 574 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 GSK3BP49841 420 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 MRPS22P82650 360 aaKnown RBP18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 CAMKMTQ7Z624 323 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 SPATA24Q86W54 205 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 OR4K1Q8NGD4 311 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 RSRC1Q96IZ7 334 aaKnown RBP18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 ITCHQ96J02 903 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 LRGUKQ96M69 825 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 OR6C1Q96RD1 312 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 OR52E6Q96RD3 313 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 TACO1Q9BSH4 297 aaKnown RBP18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 PCDHAC1Q9H158 963 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 OSGEPL1Q9H4B0 414 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 ALG2Q9H553 416 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 SLAMF8Q9P0V8 285 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 KCNK6Q9Y257 313 aa18.89■□□□□ 0.61
CTDSP2-204ENST00000548823 TRBV5-3A0A0A0MS03 114 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 ARGFXA6NJG6 315 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 CEACAM4O75871 244 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 EML2O95834 649 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 C9P02748 559 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 NDUFS1P28331 727 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 SLC7A1P30825 629 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 TIA1P31483 386 aaKnown RBP eCLIP18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 RAB28P51157 221 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 RPS13P62277 151 aaKnown RBP18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 LIPEQ05469 1076 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 TSTA3Q13630 321 aaPredicted RBP18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 DDX39BQ13838 428 aaKnown RBP18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 TMIGD1Q6UXZ0 262 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 OR8J2Q8NGG1 315 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 CXorf40BQ96DE9 158 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 SNRNP40Q96DI7 357 aaKnown RBP18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 TSSK3Q96PN8 268 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 AIF1LQ9BQI0 150 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 GPR87Q9BY21 358 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 KIR3DX1Q9H7L2 352 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 PLAGL1Q9UM63 463 aa18.88■□□□□ 0.61
CTDSP2-204ENST00000548823 DIDO1Q9BTC0 2240 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 HIVEP1P15822 2718 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 ANKUB1A6NFN9 424 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 TOX3O15405 576 aaPredicted RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 ETHE1O95571 254 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 MTHFD1P11586 935 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 FGF5P12034 268 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 CDH1P12830 882 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 PTX3P26022 381 aaPredicted RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 TRPC1P48995 793 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 ERFP50548 548 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RAE1P78406 368 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 REEP5Q00765 189 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RPE65Q16518 533 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RUNDC3AQ59EK9 446 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RABL3Q5HYI8 236 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 IYDQ6PHW0 289 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 SLC9B2Q86UD5 537 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 GPR180Q86V85 440 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 METTL4Q8N3J2 472 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RNF175Q8N4F7 328 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 C1orf52Q8N6N3 182 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 RBMXL3Q8N7X1 1067 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 DNAJC9Q8WXX5 260 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 KCTD14Q9BQ13 255 aaPredicted RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 FAM120CQ9NX05 1096 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 SNX13Q9Y5W8 968 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 CFAP20Q9Y6A4 193 aaKnown RBP18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 COLEC10Q9Y6Z7 277 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 CSMD2Q7Z408 3487 aa18.87■□□□□ 0.61
CTDSP2-204ENST00000548823 SEMA3DO95025 777 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 ACADSP16219 412 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 HOXB9P17482 250 aaPredicted RBP18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 KIR3DL1P43629 444 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 CCR8P51685 355 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 GFERP55789 205 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 PHC1P78364 1004 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 LRRC74AQ0VAA2 488 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 ELOAQ14241 798 aaKnown RBP18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 MUM1Q2TAK8 710 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 SP5Q6BEB4 398 aaPredicted RBP18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 MCEMP1Q8IX19 187 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 TNIP2Q8NFZ5 429 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 CLHC1Q8NHS4 586 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 PAIP1Q9H074 479 aaKnown RBP18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 RUBCNLQ9H714 662 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 SERHLQ9NQF3 203 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 ASF1BQ9NVP2 202 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 ARMC1Q9NVT9 282 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 TAC3Q9UHF0 121 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 MED13LQ71F56 2210 aa18.86■□□□□ 0.61
CTDSP2-204ENST00000548823 POLEQ07864 2286 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms