RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SEM1Q6ZVN7 128 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 FRA10AC1Q70Z53 315 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 ZC3HC1Q86WB0 502 aaKnown RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 SPATA6LQ8N4H0 392 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 GOLM1Q8NBJ4 401 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 RELL2Q8NC24 303 aaPredicted RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 MORN4Q8NDC4 146 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 TTLQ8NG68 377 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 DAZLQ92904 295 aaKnown RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 NINJ1Q92982 152 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 ESAMQ96AP7 390 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 F2RL3Q96RI0 385 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 MAPKAP1Q9BPZ7 522 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 NAT9Q9BTE0 207 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 TSPYL1Q9H0U9 437 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 CLEC4MQ9H2X3 399 aaPredicted RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 SACM1LQ9NTJ5 587 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 ZNF490Q9ULM2 529 aaPredicted RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 LRRC3CA6NJW4 275 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 H3BQF6 201 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 HRKO00198 91 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 RTCAO00442 366 aaKnown RBP15.19■□□□□ 0.02
SSH1-208ENST00000548522 TAPBPO15533 448 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 PIAS1O75925 651 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 LRATO95237 230 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 IVDP26440 423 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 HNMTP50135 292 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 ASPHQ12797 758 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 STX4Q12846 297 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 HYAL4Q2M3T9 481 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 PRAMEF20Q5VT98 475 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 UBE3DQ7Z6J8 389 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 ADAMTSL2Q86TH1 951 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 C9orf40Q8IXQ3 194 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 NAXEQ8NCW5 288 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 DOK4Q8TEW6 326 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 ZNF721Q8TF20 911 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 SLC6A15Q9H2J7 730 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 LDAHQ9H6V9 325 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 ZNF703Q9H7S9 590 aaPredicted RBP15.19■□□□□ 0.02
SSH1-208ENST00000548522 COPS7BQ9H9Q2 264 aaPredicted RBP15.19■□□□□ 0.02
SSH1-208ENST00000548522 PRDM7Q9NQW5 492 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 DLL4Q9NR61 685 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 CTNNAL1Q9UBT7 734 aa15.19■□□□□ 0.02
SSH1-208ENST00000548522 A0A088AWK7 358 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 TRGV5A0A0B4J1U4 118 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 FAM221AA4D161 298 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 PROM1O43490 865 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 SUSD5O60279 629 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 WDR1O75083 606 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 H2AFYO75367 372 aaKnown RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 SH3BGRLO75368 114 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 P04436 131 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 TNNI3P19429 210 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 ZNF10P21506 573 aaPredicted RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 UQCRC1P31930 480 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 KIR2DL3P43628 341 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 FASTKD3Q14CZ7 662 aaKnown RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 TGFBIQ15582 683 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 SLC25A35Q3KQZ1 300 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 WLSQ5T9L3 541 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 LYPD8Q6UX82 237 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 DGAT2L6Q6ZPD8 337 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 ANKMY2Q8IV38 441 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 OR4N5Q8IXE1 308 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 GSPT2Q8IYD1 628 aaKnown RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 KRT78Q8N1N4 520 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 NKAPQ8N5F7 415 aaKnown RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 CHDHQ8NE62 594 aaPredicted RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 IFT81Q8WYA0 676 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 ANKRD9Q96BM1 317 aaPredicted RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 RMND5BQ96G75 393 aaPredicted RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 SGCZQ96LD1 299 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 EXO5Q9H790 373 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 SLC24A3Q9HC58 644 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 SH2D2AQ9NP31 389 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 RASSF1Q9NS23 344 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 TEX264Q9Y6I9 313 aa15.18■□□□□ 0.02
SSH1-208ENST00000548522 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.18■□□□□ 0.02
SSH1-208ENST00000548522 ANKDD1BA6NHY2 528 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 FGF17O60258 216 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 EPORP19235 508 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 GSTM2P28161 218 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 HSPA7P48741 367 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 CAV1Q03135 178 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 DOC2AQ14183 400 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 SLC10A1Q14973 349 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 EFTUD2Q15029 972 aaKnown RBP eCLIP15.17■□□□□ 0.024e-6■■■■□ 25.8
SSH1-208ENST00000548522 ZNF791Q3KP31 576 aaPredicted RBP15.17■□□□□ 0.02
SSH1-208ENST00000548522 OPN5Q6U736 354 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 CROCCP2Q86T23 111 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 CDC20BQ86Y33 519 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 BBOF1Q8ND07 529 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 OR8K3Q8NH51 312 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 SARAFQ96BY9 339 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 FMO2Q99518 471 aa15.17■□□□□ 0.02
SSH1-208ENST00000548522 SORBS1Q9BX66 1292 aaKnown RBP15.17■□□□□ 0.02
SSH1-208ENST00000548522 TXLNGYQ9BZA5 131 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms