RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SMN1Q16637 294 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 AAK1Q2M2I8 961 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ZFP69Q49AA0 526 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 KLHL22Q53GT1 634 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 RTP2Q5QGT7 225 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ARMC4Q5T2S8 1044 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CCNJQ5T5M9 372 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ATXN7L2Q5T6C5 722 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PRAMEF8Q5VWM4 474 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PRAMEF7Q5VXH5 474 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 FAM219BQ5XKK7 198 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ANKRD34AQ69YU3 496 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 REEP3Q6NUK4 255 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 VHLLQ6RSH7 139 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 AGTRAPQ6RW13 159 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PTCHD4Q6ZW05 846 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 C16orf59Q7L2K0 433 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 DSG4Q86SJ6 1040 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CDH24Q86UP0 819 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PEX5LQ8IYB4 626 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 LRRC56Q8IYG6 542 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SYTL1Q8IYJ3 562 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TCEAL8Q8IYN2 117 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TAGAPQ8N103 731 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 FAM26EQ8N5C1 309 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CLDN19Q8N6F1 224 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ASCC1Q8N9N2 400 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PLA2G15Q8NCC3 412 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GPR26Q8NDV2 337 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 B3GNT7Q8NFL0 401 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 HTRA1Q92743 480 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM159Q96B96 161 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SH3KBP1Q96B97 665 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PDXPQ96GD0 296 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ZC3HAV1LQ96H79 300 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM80Q96HE8 168 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 MSLNLQ96KJ4 702 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 RIPOR3Q96MK2 946 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 QRFPRQ96P65 431 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 KCNC2Q96PR1 638 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CLSTN3Q9BQT9 956 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 CCM2Q9BSQ5 444 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SPATA5L1Q9BVQ7 753 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ALOXE3Q9BYJ1 711 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 UCK2Q9BZX2 261 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TPK1Q9H3S4 243 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 NIPAL2Q9H841 368 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 BRD9Q9H8M2 597 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SGK2Q9HBY8 427 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 A4GALTQ9NPC4 353 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PRDM6Q9NQX0 595 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 C1GALT1Q9NS00 363 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ACER3Q9NUN7 267 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 MRPS18AQ9NVS2 196 aaKnown RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 NDUFB11Q9NX14 153 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 MS4A12Q9NXJ0 267 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 TAS2R9Q9NYW1 312 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 EVLQ9UI08 416 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-225ENST00000545920 KLHL21Q9UJP4 597 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SNX7Q9UNH6 387 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 SLC22A14Q9Y267 594 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 GREB1Q4ZG55 1949 aa6.17□□□□□ -1.42
SNHG1-225ENST00000545920 EP400Q96L91 3159 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LOC100506127A0A0U1RQW1 187 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PRR23AA6NEV1 266 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LINC01387J3KSC0 135 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TLR4O00206 839 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 GRM6O15303 877 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PCDH7O60245 1069 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TSPAN3O60637 253 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ATG13O75143 517 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LRATO95237 230 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PRAMEF12O95522 483 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PTHP01270 115 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 HLA-DQB1P01920 261 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ALPPP05187 535 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 EPXP11678 715 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 EPHA2P29317 976 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ERP29P30040 261 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 VIPR1P32241 457 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TNFSF8P32971 234 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 HSD17B2P37059 387 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CRATP43155 626 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CAPZA2P47755 286 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PRLHRP49683 370 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SGSHP51688 502 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ACLYP53396 1101 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 MVDP53602 400 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CDH12P55289 794 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PPP3R1P63098 170 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PSPHP78330 225 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CHRNEQ04844 493 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms