RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CCDC115Q96NT0 180 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 EFCAB1Q9HAE3 211 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 SLC52A3Q9NQ40 469 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 THSD1Q9NS62 852 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 SH3BP4Q9P0V3 963 aa15.08■□□□□ 0
PRPF40A-212ENST00000545856 GPN3Q9UHW5 284 aaPredicted RBP15.08■□□□□ 0
PRPF40A-212ENST00000545856 A0A1W2PNU3 283 aaPredicted RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 MYO1GB0I1T2 1018 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 NR5A2O00482 541 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 AKAP10O43572 662 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 ERN1O75460 977 aaKnown RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 LRATO95237 230 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 B3GALT4O96024 378 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 IGHEP01854 428 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 SLC35E2P0CK97 266 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 OR1D4P47884 311 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 ALDH9A1P49189 494 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 PCBP4P57723 403 aaKnown RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 TIGD2Q4W5G0 525 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 C18orf63Q68DL7 685 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 COX15Q7KZN9 410 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 SNX32Q86XE0 403 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 ZC3H7AQ8IWR0 971 aaKnown RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 ST13P4Q8IZP2 240 aaPredicted RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 NLGN4XQ8N0W4 816 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 TRIML2Q8N7C3 387 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 NLGN4YQ8NFZ3 816 aaPredicted RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 GOT1L1Q8NHS2 421 aaPredicted RBP15.07■□□□□ 0
PRPF40A-212ENST00000545856 OR5P2Q8WZ92 322 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 MOAP1Q96BY2 351 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 PEX11GQ96HA9 241 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 OR52E6Q96RD3 313 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 CSF3RQ99062 836 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 GPR87Q9BY21 358 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 C1orf21Q9H246 121 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 PRTFDC1Q9NRG1 225 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 LANCL2Q9NS86 450 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 GID8Q9NWU2 228 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 PCDHGB4Q9UN71 923 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 GMEB1Q9Y692 573 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 CEP295Q9C0D2 2601 aa15.07■□□□□ 0
PRPF40A-212ENST00000545856 NUP214P35658 2090 aaPredicted RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 SPTBN2O15020 2390 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 SCN2AQ99250 2005 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 C15orf38-AP3S2A0A0A6YYH1 394 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 SCN2BO60939 215 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 ATP1B1P05026 303 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 ZCCHC18P0CG32 403 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 LAMP1P11279 417 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 ESRRAP11474 423 aaPredicted RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 ZNF28P17035 718 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 CAPN3P20807 821 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 NME5P56597 212 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 SNRPNP63162 240 aaKnown RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 OLR1P78380 273 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 TXNL4AP83876 142 aaKnown RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 PLIN5Q00G26 463 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 NCF4Q15080 339 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 MMEL1Q495T6 779 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 PRAMEF17Q5VTA0 474 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 C1orf189Q5VU69 101 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 TMEM64Q6YI46 380 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 ARPINQ7Z6K5 226 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 LRRC25Q8N386 305 aaPredicted RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 OR7A2PQ8NGA2 310 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 STT3BQ8TCJ2 826 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 MR1Q95460 341 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 GFM2Q969S9 779 aaKnown RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 MIEF2Q96C03 454 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 VPS50Q96JG6 964 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 BBS4Q96RK4 519 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 EFHD1Q9BUP0 239 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 SLC22A11Q9NSA0 550 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 C19orf25Q9UFG5 118 aaPredicted RBP15.06■□□□□ 0
PRPF40A-212ENST00000545856 AP3M1Q9Y2T2 418 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 NEUROG3Q9Y4Z2 214 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 MAU2Q9Y6X3 613 aa15.06■□□□□ 0
PRPF40A-212ENST00000545856 IGKV3D-11A0A0A0MRZ8 115 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 DCDC2BA2VCK2 349 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 DYRK3O43781 588 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 UNC5CO95185 931 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 ZGLP1P0C6A0 271 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 CPMP14384 443 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 PORP16435 677 aaPredicted RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 PPIBP23284 216 aaKnown RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 WNT3P56703 355 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 CLDN6P56747 220 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 MAT1AQ00266 395 aaKnown RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 MC1RQ01726 317 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 STX4Q12846 297 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 BNIP1Q12981 228 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 SLC13A2Q13183 592 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 CAMK2BQ13554 666 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 TLR1Q15399 786 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 NKG7Q16617 165 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 PGS1Q32NB8 556 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 TRMT5Q32P41 509 aaKnown RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 LRIF1Q5T3J3 769 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 BHLHB9Q6PI77 547 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 FAM198BQ6UWH4 519 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms