RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 STX4Q12846 297 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 DLG1Q12959 904 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 RCN2Q14257 317 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 EFTUD2Q15029 972 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP28-215ENST00000545608 ZKSCAN8Q15776 578 aaPredicted RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 PDK4Q16654 411 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 GXYLT1Q4G148 440 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 TMEM211Q6ICI0 200 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 ARHGAP11AQ6P4F7 1023 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 HSDL2Q6YN16 418 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 C3orf62Q6ZUJ4 267 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 CCDC71Q8IV32 467 aaPredicted RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 OR4N5Q8IXE1 308 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 GPALPP1Q8IXQ4 340 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 ACOT4Q8N9L9 421 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 PDPRQ8NCN5 879 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 MORN4Q8NDC4 146 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 LILRB4Q8NHJ6 448 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 CHTF18Q8WVB6 975 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 CDKL2Q92772 493 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 DAZLQ92904 295 aaKnown RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 EXT2Q93063 718 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 KIAA1191Q96A73 305 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 ANKRD9Q96BM1 317 aaPredicted RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 TSPAN17Q96FV3 270 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 SCYL1Q96KG9 808 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 UBXN10Q96LJ8 280 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 CPNE1Q99829 537 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 EFCAB11Q9BUY7 163 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 MS4A8Q9BY19 250 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 TTTY12Q9BZ98 90 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 CD244Q9BZW8 370 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 OR8D2Q9GZM6 311 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 TP63Q9H3D4 680 aaPredicted RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 CNOT10Q9H9A5 744 aaKnown RBP7.84□□□□□ -1.15
USP28-215ENST00000545608 MCCC2Q9HCC0 563 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 LYRM4Q9HD34 91 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 LIPGQ9Y5X9 500 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 FBN2P35556 2912 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 LRBAP50851 2863 aa7.84□□□□□ -1.15
USP28-215ENST00000545608 APCP25054 2843 aa7.84□□□□□ -1.16
USP28-215ENST00000545608 CACNA1CQ13936 2221 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 F8P00451 2351 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 FAM90A27PA6NNH2 459 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 C17orf105B2RV13 164 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 SAP18O00422 153 aaKnown RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 EREGO14944 169 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 EIF3HO15372 352 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP28-215ENST00000545608 TOXO94900 526 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 GLSO94925 669 aaPredicted RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 SCELO95171 688 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 FAM157BP0CG42 384 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 PCNAP12004 261 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 IGFBP2P18065 325 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 CAPN3P20807 821 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 HPDP32754 393 aaPredicted RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 CASP2P42575 452 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 DNASE1L1P49184 302 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 NUP107P57740 925 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 RAB10P61026 200 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TFF3Q07654 80 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TGM3Q08188 693 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 PMPCAQ10713 525 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 FOXO1Q12778 655 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ILF2Q12905 390 aaKnown RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 LAPTM5Q13571 262 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 SERTAD2Q14140 314 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 E2F2Q14209 437 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TESK1Q15569 626 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TBCCQ15814 346 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 HIST2H2ACQ16777 129 aaPredicted RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 PAGE2BQ5JRK9 111 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 HIST2H2AA3Q6FI13 130 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 PAOXQ6QHF9 649 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 DGAT2L6Q6ZPD8 337 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 RTL4Q6ZR62 310 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 CYS1Q717R9 158 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 CMC1Q7Z7K0 106 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ISCA2Q86U28 154 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 RNF175Q8N4F7 328 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TMEM251Q8N6I4 163 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 BBOF1Q8ND07 529 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 SRFBP1Q8NEF9 429 aaKnown RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 OR5M9Q8NGP3 310 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 OR8K3Q8NH51 312 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 OR14A16Q8NHC5 309 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 SLC2A12Q8TD20 617 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 DOK4Q8TEW6 326 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ZNF721Q8TF20 911 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ASB5Q8WWX0 329 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 RND1Q92730 232 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 PPWD1Q96BP3 646 aaKnown RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 KCNC2Q96PR1 638 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ERP44Q9BS26 406 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 TBCDQ9BTW9 1192 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 SORBS1Q9BX66 1292 aaKnown RBP7.83□□□□□ -1.16
USP28-215ENST00000545608 ROGDIQ9GZN7 287 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 OR51B5Q9H339 312 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ALG9Q9H6U8 611 aa7.83□□□□□ -1.16
USP28-215ENST00000545608 ZDHHC11Q9H8X9 412 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms