RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GRIP1Q9Y3R0 1128 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ST14Q9Y5Y6 855 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 BRCA1P38398 1863 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 FEZF1A0PJY2 475 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DUXAA6NLW8 204 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MAGEB3O15480 346 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 STATHP02808 62 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OR12D1P0DN82 309 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ADRB3P13945 408 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DCDC1P59894 354 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MAD2L1BPQ15013 274 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 TBPL2Q6SJ96 375 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FAM180AQ6UWF9 173 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RIMKLAQ8IXN7 391 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RNF175Q8N4F7 328 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 WDR48Q8TAF3 677 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 NEIL2Q969S2 332 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 LMLNQ96KR4 655 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 IL17FQ96PD4 163 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MBOAT4Q96T53 435 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC46A2Q9BY10 475 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 KCNN2Q9H2S1 579 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MCUBQ9NWR8 336 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DNAJC27Q9NZQ0 273 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 GTF2A1LQ9UNN4 478 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 HTR3EA5X5Y0 456 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FAM170BA6NMN3 283 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SCAMP1O15126 338 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 RFPL2O75678 378 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 C1orf105O95561 183 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 PRR35P0CG20 571 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 GSTT2BP0CG30 244 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CD1EP15812 388 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OMPP47874 163 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ELOAQ14241 798 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 C11orf91Q3C1V1 193 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CRTC2Q53ET0 693 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 ZNF776Q68DI1 518 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 PHC2Q8IXK0 858 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC5A8Q8N695 610 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OR8J2Q8NGG1 315 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FAM110BQ8TC76 370 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 HCAR2Q8TDS4 363 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 GAB3Q8WWW8 586 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 KCTD7Q96MP8 289 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ZNF717Q9BY31 904 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 ZDHHC4Q9NPG8 344 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 GPR83Q9NYM4 423 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 EIF3KQ9UBQ5 218 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 SPIN1Q9Y657 262 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 ANK1P16157 1881 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 SH3D21A4FU49 640 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RIIAD1A6NNX1 92 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 H3BNC9 293 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 H7BY64 318 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ITGB7P26010 798 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 NDUFS1P28331 727 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MAT2AP31153 395 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 HOXD12P35452 270 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RPL4P36578 427 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 MAGEA2P43356 314 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DAPP51397 102 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DGKEP52429 567 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CXCR4P61073 352 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RPA4Q13156 261 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 NFE2L1Q14494 772 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 MEDAGQ5VYS4 303 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC25A24Q6NUK1 477 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 VRK3Q8IV63 474 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC22A15Q8IZD6 547 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OR7G3Q8NG95 312 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 OR13F1Q8NGS4 319 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RAB8BQ92930 207 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 DTD2Q96FN9 168 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 PRAP1Q96NZ9 151 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC22A12Q96S37 553 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RAD9AQ99638 391 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 LINC00597Q9H2U6 94 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 TPK1Q9H3S4 243 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 NEK6Q9HC98 313 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 EXOSC1Q9Y3B2 195 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 CLCA1A8K7I4 914 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 TSPAN12O95859 305 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 GGT2P36268 569 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 CTSCP53634 463 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 EMX1Q04741 257 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 SPCS2Q15005 226 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 OLFML2AQ68BL7 652 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 Q6ZNB5 142 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 PARS2Q7L3T8 475 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 RTL10Q7L3V2 364 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 VN1R5Q7Z5H4 357 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 PDZD3Q86UT5 571 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 FAM20CQ8IXL6 584 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 TMEM145Q8NBT3 493 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms