RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 METTL4Q8N3J2 472 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ZCCHC7Q8N3Z6 543 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 FITM2Q8N6M3 262 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CAMKVQ8NCB2 501 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 PPFIBP2Q8ND30 876 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 OR1L3Q8NH93 324 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TESCQ96BS2 214 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ERP27Q96DN0 273 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CLIP3Q96DZ5 547 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TM4SF19Q96DZ7 209 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MVB12AQ96EY5 273 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 IL17FQ96PD4 163 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 OR2A5Q96R48 311 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 OR52B2Q96RD2 323 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ZFYVE21Q9BQ24 234 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 DPH2Q9BQC3 489 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 EBF4Q9BQW3 602 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 DPH7Q9BTV6 452 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TBCDQ9BTW9 1192 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CCDC106Q9BWC9 280 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MS4A8Q9BY19 250 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ACPTQ9BZG2 426 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 GRIP2Q9C0E4 1043 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 NMUR2Q9GZQ4 415 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 MMADHCQ9H3L0 296 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ACTR5Q9H9F9 607 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 LRTM1Q9HBL6 345 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 AIG1Q9NVV5 245 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 C5AR2Q9P296 337 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 ERRFI1Q9UJM3 462 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TIMM22Q9Y584 194 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 SLC22A7Q9Y694 548 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 CAPN7Q9Y6W3 813 aa6.22□□□□□ -1.41
CDCA3-209ENST00000544610 TNRC6AQ8NDV7 1962 aaKnown RBP6.22□□□□□ -1.41
CDCA3-209ENST00000544610 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 LRIT2A6NDA9 550 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 A6NL46 340 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MAGEB17A8MXT2 336 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TMEM150CB9EJG8 249 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 H7BY64 318 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PSMD12O00232 456 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SKAP2O75563 359 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SNRNP200O75643 2136 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 KLF7O75840 302 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 IL6P05231 212 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 JUNP05412 331 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 IFI6P09912 130 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SLC35G6P0C7Q6 338 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 LINC00032P0C843 101 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 ST6GAL1P15907 406 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TSPAN8P19075 237 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 POLR2CP19387 275 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CDH3P22223 829 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 COL8A1P27658 744 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MAGEA8P43361 318 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CLDN8P56748 225 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TBL3Q12788 808 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 FAM53BQ14153 422 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 RPS6KA2Q15349 733 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 FBXO48Q5FWF7 155 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CRB2Q5IJ48 1285 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CATSPEREQ5SY80 951 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CRYBG3Q68DQ2 2970 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 NOXRED1Q6NXP6 359 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 IGFL3Q6UXB1 125 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 HACD2Q6Y1H2 254 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CCDC121Q6ZUS5 278 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 R3HCC1LQ7Z5L2 792 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MRGPREQ86SM8 312 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 RAB43Q86YS6 212 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MYLK4Q86YV6 388 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SAMD14Q8IZD0 417 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 FNDC5Q8NAU1 212 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CREB3L4Q8TEY5 395 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 GAL3ST3Q96A11 431 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 RGMAQ96B86 450 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SNRNP40Q96DI7 357 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MOCOSQ96EN8 888 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 C3orf30Q96M34 536 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PRAP1Q96NZ9 151 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 IP6K3Q96PC2 410 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 KCNC2Q96PR1 638 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TRAPPC9Q96Q05 1148 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 KCNA7Q96RP8 456 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PRPF18Q99633 342 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 BARD1Q99728 777 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 XKR8Q9H6D3 395 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 WDR55Q9H6Y2 383 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 DDX31Q9H8H2 851 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SLC6A20Q9NP91 592 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 ASF1BQ9NVP2 202 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MS4A12Q9NXJ0 267 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SPHK1Q9NYA1 384 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TAS2R7Q9NYW3 318 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 EHD3Q9NZN3 535 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 TAGLN3Q9UI15 199 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms