RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ALPPP05187 535 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 GRK2P25098 689 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 TIA1P31483 386 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX55-211ENST00000544429 ACSM2AQ08AH3 577 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 BIKQ13323 160 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 TTMPQ5BVD1 217 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 CRB2Q5IJ48 1285 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 AGAP7PQ5VUJ5 663 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 ACSM2BQ68CK6 577 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 B3GNT7Q8NFL0 401 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 OR2T11Q8NH01 316 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 FAM76AQ8TAV0 307 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX55-211ENST00000544429 FCRL1Q96LA6 429 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 AGAP4Q96P64 663 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 LMF1Q96S06 567 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 ZDHHC2Q9UIJ5 367 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 PCDHA9Q9Y5H5 950 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 CROCCQ5TZA2 2017 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 ARHGAP10A1A4S6 786 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 SNUPNO95149 360 aaKnown RBP17.86■□□□□ 0.45
DDX55-211ENST00000544429 GPR75O95800 540 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 STT3AP46977 705 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 CD97P48960 835 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 ABCE1P61221 599 aaKnown RBP17.86■□□□□ 0.45
DDX55-211ENST00000544429 STX4Q12846 297 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 NFATC3Q12968 1075 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 XKR7Q5GH72 579 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 SH2D4BQ5SQS7 431 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 OR52E8Q6IFG1 317 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 ISLR2Q6UXK2 745 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 OR4N5Q8IXE1 308 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 RBMXL3Q8N7X1 1067 aaKnown RBP17.86■□□□□ 0.45
DDX55-211ENST00000544429 TWIST2Q8WVJ9 160 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 SORT1Q99523 831 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 NPAS2Q99743 824 aa17.86■□□□□ 0.45
DDX55-211ENST00000544429 ZNF395Q9H8N7 513 aaPredicted RBP17.86■□□□□ 0.45
DDX55-211ENST00000544429 ZNF223Q9UK11 482 aaPredicted RBP17.86■□□□□ 0.45
DDX55-211ENST00000544429 C1orf226A1L170 272 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 GLOD5A6NK44 160 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 SLC28A1O00337 649 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 PCDH7O60245 1069 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 GUCY1B2O75343 617 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 LYPLA1O75608 230 aaPredicted RBP17.85■□□□□ 0.45
DDX55-211ENST00000544429 MYO1DO94832 1006 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 NEFHP12036 1026 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 BGNP21810 368 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 GSTM5P46439 218 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 ID2Q02363 134 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 MFAP5Q13361 173 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 IRAK1BP1Q5VVH5 260 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 SLC48A1Q6P1K1 146 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 MMP21Q8N119 569 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 ANKRD42Q8N9B4 389 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 WDR41Q9HAD4 459 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 PNO1Q9NRX1 252 aaKnown RBP17.85■□□□□ 0.45
DDX55-211ENST00000544429 ZNF446Q9NWS9 450 aa17.85■□□□□ 0.45
DDX55-211ENST00000544429 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.85■□□□□ 0.45
DDX55-211ENST00000544429 A8MUA0 341 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 B8ZZF3 427 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 LSM1O15116 133 aaKnown RBP17.84■□□□□ 0.45
DDX55-211ENST00000544429 DPM1O60762 260 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 DDAH2O95865 285 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 CHEK2O96017 543 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 GALNSP34059 522 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 BST1Q10588 318 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 KLRB1Q12918 225 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 IMPG1Q17R60 797 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 HHATQ5VTY9 493 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 B3GNTL1Q67FW5 361 aaPredicted RBP17.84■□□□□ 0.45
DDX55-211ENST00000544429 DGAT2L6Q6ZPD8 337 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 ST13P4Q8IZP2 240 aaPredicted RBP17.84■□□□□ 0.45
DDX55-211ENST00000544429 LGI4Q8N135 537 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 TMEM132CQ8N3T6 1108 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 KIF2BQ8N4N8 673 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 SIRT6Q8N6T7 355 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 MORN4Q8NDC4 146 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 OR14A16Q8NHC5 309 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 RNF32Q9H0A6 362 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 C1orf109Q9NX04 203 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 PTGFRNQ9P2B2 879 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 HEY2Q9UBP5 337 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 FIS1Q9Y3D6 152 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 RAP2CQ9Y3L5 183 aa17.84■□□□□ 0.45
DDX55-211ENST00000544429 MYOCOSA0A1B0GUC4 107 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 A0A1W2PS29 197 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 PIP5K1BO14986 540 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 SUV39H1O43463 412 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 RGS14O43566 566 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 SNNO75324 88 aaPredicted RBP17.83■□□□□ 0.44
DDX55-211ENST00000544429 HSPA4LO95757 839 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 IGKV3-11P04433 115 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 LINC00032P0C843 101 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 SLC35E2P0CK97 266 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 DRD2P14416 443 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 ALOX15P16050 662 aaPredicted RBP17.83■□□□□ 0.44
DDX55-211ENST00000544429 SLC1A6P48664 564 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 TAS2R50P59544 299 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 BTKQ06187 659 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 SPRED3Q2MJR0 410 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms