RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMCO6Q96DC7 493 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SPHK2Q9NRA0 654 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SPATA6Q9NWH7 488 aaPredicted RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SNX11Q9Y5W9 270 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 A0A1W2PQL4 384 aaPredicted RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 EIF2S1P05198 315 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 ASMTP46597 345 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 PTPN5P54829 565 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 HSPB3Q12988 150 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TARDBPQ13148 414 aaKnown RBP eCLIP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SEC23BQ15437 767 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 ARHGAP15Q53QZ3 475 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 OR2G6Q5TZ20 316 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 LIPJQ5W064 366 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SYCE2Q6PIF2 218 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 GEMIN6Q8WXD5 167 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 KLK6Q92876 244 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 WFDC6Q9BQY6 131 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CHST8Q9H2A9 424 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 KLK4Q9Y5K2 254 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 SPIN1Q9Y657 262 aaPredicted RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 A0A1W2PRB8 838 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MVDP53602 400 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 ZNF79Q15937 498 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 SPDYE7PQ495Y7 208 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 LYPD8Q6UX82 237 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 CEACAM20Q6UY09 585 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MSANTD1Q6ZTZ1 278 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 POP5Q969H6 163 aaKnown RBP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 TM9SF2Q99805 663 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 TSSK6Q9BXA6 273 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 C11orf54Q9H0W9 315 aaPredicted RBP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 ABCG4Q9H172 646 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 RETREG1Q9H6L5 497 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 SSR3Q9UNL2 185 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MRPS23Q9Y3D9 190 aaKnown RBP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 GFYI3L273 518 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 TPD52L2O43399 206 aaKnown RBP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 LATO43561 262 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 SGTAO43765 313 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 IL3P08700 152 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 ITGA2P17301 1181 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 LIM2P55344 173 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MESP2Q0VG99 397 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MPEG1Q2M385 716 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 ATAT1Q5SQI0 421 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 MFSD4BQ5TF39 518 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 ERAP2Q6P179 960 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 TRIM40Q6P9F5 258 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 PGBD3Q8N328 593 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 CBARPQ8N350 705 aaPredicted RBP14.59□□□□□ -0.07
CNOT9-208ENST00000542068 OTULINQ96BN8 352 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 SPNS1Q9H2V7 528 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 REEP4Q9H6H4 257 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 HS3ST2Q9Y278 367 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 DYRK1BQ9Y463 629 aa14.59□□□□□ -0.07
CNOT9-208ENST00000542068 TNFRSF21O75509 655 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 ARHGEF15O94989 841 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 EPCAMP16422 314 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 IMPA1P29218 277 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 VIPR1P32241 457 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 AP1S2P56377 157 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 GPR50Q13585 617 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 Q5BKY6 102 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 FAM46DQ8NEK8 389 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 CHAC2Q8WUX2 184 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 BTNL2Q9UIR0 455 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 STOML2Q9UJZ1 356 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 GPR52Q9Y2T5 361 aa14.58□□□□□ -0.07
CNOT9-208ENST00000542068 FAM172BPA6NC97 362 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CAPN5O15484 640 aaPredicted RBP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PRMT3O60678 531 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 HBQ1P09105 142 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 TIMP2P16035 220 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PPIBP23284 216 aaKnown RBP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 TBPL1P62380 186 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PIN1Q13526 163 aaPredicted RBP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 MED27Q6P2C8 311 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 BRAT1Q6PJG6 821 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 KRT73Q86Y46 540 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 TP53I13Q8NBR0 393 aaPredicted RBP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 KLHL6Q8WZ60 621 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 GLYATL1Q969I3 302 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 RAD9AQ99638 391 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PRR14Q9BWN1 585 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 POLR2J3Q9H1A7 115 aaKnown RBP14.58□□□□□ -0.08
CNOT9-208ENST00000542068 IL36AQ9UHA7 158 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CORO2BQ9UQ03 480 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 ENPP4Q9Y6X5 453 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 SLC35F4A4IF30 521 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 FFAR1O14842 300 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CTSLP07711 333 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CLTBP09497 229 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 CCNYL3P0C7X3 344 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 PRPH2P23942 346 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 SDC2P34741 201 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 XCR1P46094 333 aa14.58□□□□□ -0.08
CNOT9-208ENST00000542068 XKP51811 444 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms