RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GOT2P00505 430 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 C9P02748 559 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 RPN2P04844 631 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 APOA4P06727 396 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ANKRD34CP0C6C1 535 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 LIPCP11150 499 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 FGF3P11487 239 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 MLNP12872 115 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 FOXN2P32314 431 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CA5AP35218 305 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 BUD31P41223 144 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 GRIA1P42261 906 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 RPS6KA3P51812 740 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CFHR1Q03591 330 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ACVR1Q04771 509 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 FHL2Q14192 279 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 GPR18Q14330 331 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 IL11RAQ14626 422 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 C16orf72Q14CZ0 275 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 TRIP13Q15645 432 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 COL28A1Q2UY09 1125 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 SYTL3Q4VX76 610 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 MANEAQ5SRI9 462 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 PTRHD1Q6GMV3 140 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CAPRIN2Q6IMN6 1127 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 IRGCQ6NXR0 463 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CASC4Q6P4E1 433 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 TTC23LQ6PF05 361 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 PACS1Q6VY07 963 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 FAM83HQ6ZRV2 1179 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ARHGAP22Q7Z5H3 698 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 AMIGO2Q86SJ2 522 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 PRUNE1Q86TP1 453 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 HOOK3Q86VS8 718 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 LRRC6Q86X45 466 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 KMT5CQ86Y97 462 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 OTUD6BQ8N6M0 293 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 MCUQ8NE86 351 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ACVR1CQ8NER5 493 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 OR13J1Q8NGT2 312 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ASZ1Q8WWH4 475 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ELMO1Q92556 727 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 MS4A14Q96JA4 679 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 C9orf72Q96LT7 481 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 GPR78Q96P69 363 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 TGM7Q96PF1 710 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 PANX3Q96QZ0 392 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CCNL2Q96S94 520 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CD180Q99467 661 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 NAPGQ99747 312 aaPredicted RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 EFHD1Q9BUP0 239 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 KIFC1Q9BW19 673 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CARD6Q9BX69 1037 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 TRIM31Q9BZY9 425 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 COG4Q9H9E3 785 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 XAB2Q9HCS7 855 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 FBXO8Q9NRD0 319 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 CHRAC1Q9NRG0 131 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 HRASLS2Q9NWW9 162 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ALKBH4Q9NXW9 302 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 ASIC5Q9NY37 505 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 EPHA6Q9UF33 1036 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 POLG2Q9UHN1 485 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 WDR37Q9Y2I8 494 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 RRP15Q9Y3B9 282 aaKnown RBP5.16□□□□□ -1.58
CPSF7-220ENST00000541963 SAR1BQ9Y6B6 198 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 SPTBN2O15020 2390 aa5.16□□□□□ -1.58
CPSF7-220ENST00000541963 A0A087WUV0 522 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 A0A1W2PNU3 283 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 OR5K3A6NET4 321 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ERICH4A6NGS2 130 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 H3BMM5 538 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CCDC188H7C350 402 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PRYO14603 147 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PRMT5O14744 637 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CASC3O15234 703 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 MT-ND3P03897 115 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ALDOCP09972 364 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 NEFHP12036 1026 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CCL4P13236 92 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 HOXB9P17482 250 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 IGFBP2P18065 325 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ITIH1P19827 911 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 GSTM2P28161 218 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 MAGEA6P43360 314 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CAPZBP47756 277 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ACY1Q03154 408 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 FOXM1Q08050 763 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 GAB1Q13480 694 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 KCNJ11Q14654 390 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TMED2Q15363 201 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 GPR68Q15743 365 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 DNAJC21Q5F1R6 531 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PAPD7Q5XG87 772 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PRSS42Q7Z5A4 293 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 LMNTD2Q8IXW0 634 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PIANPQ8IYJ0 282 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TBC1D21Q8IYX1 336 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms