RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CES4AQ5XG92 561 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 C18orf63Q68DL7 685 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 SLC48A1Q6P1K1 146 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 PAPD4Q6PIY7 484 aaKnown RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 LANCL3Q6ZV70 420 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 CRLF3Q8IUI8 442 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 ST13P4Q8IZP2 240 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 OR14A16Q8NHC5 309 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 DNAJB14Q8TBM8 379 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 PIWIL2Q8TC59 973 aaKnown RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 TSLPQ969D9 159 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 ANKRD9Q96BM1 317 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 TUBGCP3Q96CW5 907 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 ART5Q96L15 291 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 FCRL1Q96LA6 429 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 MAGEB18Q96M61 343 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 ZNF160Q9HCG1 818 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 MMP25Q9NPA2 562 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 TEX10Q9NXF1 929 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 GPR83Q9NYM4 423 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 C5AR2Q9P296 337 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 TEKT2Q9UIF3 430 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 KMT2BQ9UMN6 2715 aaPredicted RBP17.59■□□□□ 0.41
VPS33A-205ENST00000541169 CACNA1BQ00975 2339 aa17.59■□□□□ 0.41
VPS33A-205ENST00000541169 CFAP47Q6ZTR5 3102 aa17.58■□□□□ 0.41
VPS33A-205ENST00000541169 IFNA16P05015 189 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 SLC35E2P0CK97 266 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 ITGA3P26006 1051 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 RPL3P39023 403 aaKnown RBP17.58■□□□□ 0.4
VPS33A-205ENST00000541169 STT3AP46977 705 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 CCL11P51671 97 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 HNRNPFP52597 415 aaKnown RBP17.58■□□□□ 0.4
VPS33A-205ENST00000541169 EFNA3P52797 238 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 TAS2R50P59544 299 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 FOLH1Q04609 750 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 EEF1A2Q05639 463 aaKnown RBP17.58■□□□□ 0.4
VPS33A-205ENST00000541169 KCNAB2Q13303 367 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 LINC00303Q3SY05 128 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 VWA5B1Q5TIE3 1220 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 TCTN3Q6NUS6 607 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 RGS9BPQ6ZS82 235 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 MORN4Q8NDC4 146 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 C16orf78Q8WTQ4 265 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 TM9SF4Q92544 642 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF764Q96H86 408 aaPredicted RBP17.58■□□□□ 0.4
VPS33A-205ENST00000541169 DGAT2Q96PD7 388 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 SLC25A23Q9BV35 468 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 GIMAP4Q9NUV9 329 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 TAS2R7Q9NYW3 318 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 DLGAP4Q9Y2H0 992 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF780BQ9Y6R6 833 aa17.58■□□□□ 0.4
VPS33A-205ENST00000541169 OR2W5A6NFC9 320 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ATXN7O15265 892 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 FGF17O60258 216 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 LDB3O75112 727 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 SKAP2O75563 359 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 SEC24DO94855 1032 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 TGDSO95455 350 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 PRR35P0CG20 571 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 PRPS2P11908 318 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ALOX15P16050 662 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 CSNK2A2P19784 350 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 DDCP20711 480 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 SLC26A5P58743 744 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 BTBD16Q32M84 506 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 C6orf136Q5SQH8 315 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 AGAP7PQ5VUJ5 663 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ATG14Q6ZNE5 492 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 CLNKQ7Z7G1 428 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 TMEM151BQ8IW70 566 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 WDR75Q8IWA0 830 aaKnown RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 B3GNT7Q8NFL0 401 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 OR2T11Q8NH01 316 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 CKAP2Q8WWK9 683 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 MTERF3Q96E29 417 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 AGAP4Q96P64 663 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 WDR77Q9BQA1 342 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 MEAF6Q9HAF1 191 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 MIEF1Q9NQG6 463 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 PNO1Q9NRX1 252 aaKnown RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ASIC5Q9NY37 505 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 EIF3LQ9Y262 564 aaKnown RBP17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF451Q9Y4E5 1061 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 CLDN16Q9Y5I7 305 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 ZFHX4Q86UP3 3567 aa17.57■□□□□ 0.4
VPS33A-205ENST00000541169 OR10H2O60403 315 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 TNNI3P19429 210 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 PGDP52209 483 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 RPL38P63173 70 aaKnown RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 EMX2Q04743 252 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 PDCD2Q16342 344 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 GALNTL6Q49A17 601 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 RFTN2Q52LD8 501 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 CRB2Q5IJ48 1285 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 C6orf163Q5TEZ5 329 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 CPZQ66K79 652 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 R3HCC1LQ7Z5L2 792 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms