RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PSMB4P28070 264 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 RBL1P28749 1068 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CYLC1P35663 651 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PPARGP37231 505 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CDKN2BP42772 138 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 MAGEA5P43359 124 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 BDKRB1P46663 353 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SSR4P51571 173 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CLCN2P51788 898 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 MYL5Q02045 173 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ACKR1Q16570 336 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 TYSND1Q2T9J0 566 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CHRFAM7AQ494W8 412 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ANKRD20A4Q4UJ75 823 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CCDC38Q502W7 563 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ANKRD20A2Q5SQ80 823 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ANKRD20A1Q5TYW2 823 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ANKRD20A3Q5VUR7 823 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ICE2Q659A1 982 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 QSOX2Q6ZRP7 698 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 H2AFVQ71UI9 128 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 VN1R4Q7Z5H5 301 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PDSS2Q86YH6 399 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 LACC1Q8IV20 430 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 KLHDC8BQ8IXV7 354 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 STPG3Q8N7X2 389 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CAMKVQ8NCB2 501 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 NAXEQ8NCW5 288 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 OR9A1PQ8NGU1 263 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PPP1R14CQ8TAE6 165 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 LKAAEAR1Q8TD35 194 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ASB15Q8WXK1 588 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CTNNBL1Q8WYA6 563 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 TBC1D20Q96BZ9 403 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 NTNG2Q96CW9 530 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PANX2Q96RD6 677 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CCL19Q99731 98 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 TACO1Q9BSH4 297 aaKnown RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 FAM129AQ9BZQ8 928 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 NUP62CLQ9H1M0 184 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 LDAHQ9H6V9 325 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SPTLC3Q9NUV7 552 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 HPF1Q9NWY4 346 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 JKAMPQ9P055 326 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 KCMF1Q9P0J7 381 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ZFP69BQ9UJL9 534 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ERVK-11Q9UQG0 969 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 DRG1Q9Y295 367 aaKnown RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ZKSCAN5Q9Y2L8 839 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PCDHA3Q9Y5H8 950 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SLC22A7Q9Y694 548 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 NFS1Q9Y697 457 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 TGP01266 2768 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF407Q9C0G0 2248 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PHF3Q92576 2039 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 IGKV3D-11A0A0A0MRZ8 115 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 A0A0G2JMM0 328 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TRBV11-1A0A0K0K1C0 115 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ATP6AP2A0A1C7CYW4 349 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 A0A1W2PPB8 328 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 A0A1W2PRS3 328 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 KRT87PA6NCN2 255 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 OR51F1A6NGY5 319 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 IQCF5A8MTL0 148 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 KIR3DP1A8MWS1 328 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 EEF1E1-BLOC1S5C9J1V9 151 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 MYO1CO00159 1063 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PRMT5O14744 637 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SLC16A5O15375 505 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 EEF1E1O43324 174 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TMCC2O75069 709 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ATP6AP2O75787 350 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF189O75820 626 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ZFAND5O76080 213 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SOX30O94993 753 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SIX3O95343 332 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 MATN4O95460 622 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 GOT2P00505 430 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 FAM157CP0CG43 387 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 CTSSP25774 331 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ATP5DP30049 168 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 OPRM1P35372 400 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SLC1A1P43005 524 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PTH2RP49190 550 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF136P52737 540 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PNLIPRP1P54315 467 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 RPS15AP62244 130 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 FOXO1Q12778 655 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 CAPRIN1Q14444 709 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SPARCL1Q14515 664 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 POU6F1Q14863 301 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 HERC3Q15034 1050 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SF3B4Q15427 424 aaKnown RBP eCLIP4.23□□□□□ -1.734e-47■■■■■ 46.5
SNHG1-214ENST00000540865 SIX1Q15475 284 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TERF2Q15554 542 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms