RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
USP3-204ENST00000540797 DHFRP00374 187 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 PGCP20142 388 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 PRKACGP22612 351 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 ERVPABLB-1P60509 514 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 SH3BP2P78314 561 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 RAET1LQ5VY80 246 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 BICRALQ6AI39 1079 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 PAMR1Q6UXH9 720 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 SPATC1Q76KD6 591 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 OR2L2Q8NH16 312 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 PRR11Q96HE9 360 aaPredicted RBP13.49□□□□□ -0.25
USP3-204ENST00000540797 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 OR1F2PQ96R84 312 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 A0A1B0GVT2 93 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 FARS2O95363 451 aaKnown RBP13.49□□□□□ -0.25
USP3-204ENST00000540797 CTSCP53634 463 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 AP3S2P59780 193 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 RPS26P62854 115 aaKnown RBP13.49□□□□□ -0.25
USP3-204ENST00000540797 CTBSQ01459 385 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 NFATC4Q14934 902 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 SLC35F1Q5T1Q4 408 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 FIGNL1Q6PIW4 674 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 ERMP1Q7Z2K6 904 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 GPR149Q86SP6 731 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 SERINC2Q96SA4 455 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 PKP2Q99959 881 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 SNTG1Q9NSN8 517 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 DNAJC15Q9Y5T4 150 aa13.49□□□□□ -0.25
USP3-204ENST00000540797 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 HMGB3O15347 200 aaKnown RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 H6PDO95479 791 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 MPP2Q14168 576 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 RBM48Q5RL73 367 aaKnown RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 C1orf94Q6P1W5 598 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 FBXO42Q6P3S6 717 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ARL9Q6T311 187 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 FAM86B1Q8N7N1 296 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 OR52E1Q8NGJ3 308 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ARRDC2Q8TBH0 407 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 STON2Q8WXE9 905 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 DIO2Q92813 273 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 GPN1Q9HCN4 374 aaPredicted RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 FKBP7Q9Y680 259 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 J3QLW9 94 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ZNF19P17023 458 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 PSMD7P51665 324 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 NUDT6P53370 316 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 NDUFAF5Q5TEU4 345 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 LCTLQ6UWM7 567 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 QSOX2Q6ZRP7 698 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 HMGN2P46Q86SG4 172 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 COL18A1P39060 1754 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 A0A1W2PPL8 197 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 OR2B6P58173 313 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ZUFSPQ96AP4 578 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 LRRC46Q96FV0 321 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 VILLO15195 856 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ACSL1P33121 698 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 CDKL4Q5MAI5 379 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 ANKFN1Q8N957 763 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 WDR77Q9BQA1 342 aaPredicted RBP13.48□□□□□ -0.25
USP3-204ENST00000540797 CRB3Q9BUF7 120 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 KLHL31Q9H511 634 aa13.48□□□□□ -0.25
USP3-204ENST00000540797 MYH8P13535 1937 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 HOXA9P31269 272 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 PLP2Q04941 152 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 OR6C4Q8NGE1 309 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 OR2A12Q8NGT7 310 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 DKK3Q9UBP4 350 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 SOBPA7XYQ1 873 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 EEDO75530 441 aaKnown RBP13.47□□□□□ -0.25
USP3-204ENST00000540797 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 NAT6Q93015 286 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
USP3-204ENST00000540797 TM9SF2Q99805 663 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 TIMM29Q9BSF4 260 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 DOHHQ9BU89 302 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 B3GNT4Q9C0J1 378 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 CPNE7Q9UBL6 633 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 HS3ST2Q9Y278 367 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 PEX16Q9Y5Y5 336 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 TBX10O75333 385 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 MAGP20916 626 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 FOLR3P41439 243 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 HTR6P50406 440 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 BCAP31P51572 246 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 CTBP2P56545 445 aa13.47□□□□□ -0.25
USP3-204ENST00000540797 FGL2Q14314 439 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms