RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C16orf52Q8NHV5 167 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 DCAKDQ8WVC6 231 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 PHF21BQ96EK2 531 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 DGAT2Q96PD7 388 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 NOL11Q9H8H0 719 aaKnown RBP19.46■□□□□ 0.71
CHFR-217ENST00000540537 XPR1Q9UBH6 696 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 ATG4BQ9Y4P1 393 aa19.46■□□□□ 0.71
CHFR-217ENST00000540537 A0A087WUV0 522 aaPredicted RBP19.45■□□□□ 0.7
CHFR-217ENST00000540537 A0A0A6YYD5 115 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 OR7A17O14581 309 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 SMIM24O75264 130 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 OR6B1O95007 311 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 ETHE1O95571 254 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 BSGP35613 385 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 BUD31P41223 144 aaPredicted RBP19.45■□□□□ 0.7
CHFR-217ENST00000540537 SOX3P41225 446 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 CCNG1P51959 295 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 ADORA2A-AS1P86434 159 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 HSF1Q00613 529 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 PLIN5Q00G26 463 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 SP5Q6BEB4 398 aaPredicted RBP19.45■□□□□ 0.7
CHFR-217ENST00000540537 MRM1Q6IN84 353 aaKnown RBP19.45■□□□□ 0.7
CHFR-217ENST00000540537 IL20RBQ6UXL0 311 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 OR4N5Q8IXE1 308 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 ZNF721Q8TF20 911 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 ATP6V1E2Q96A05 226 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 SCYL1Q96KG9 808 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 NTMT1Q9BV86 223 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 DDX31Q9H8H2 851 aaKnown RBP19.45■□□□□ 0.7
CHFR-217ENST00000540537 PCTPQ9UKL6 214 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 MEMO1Q9Y316 297 aa19.45■□□□□ 0.7
CHFR-217ENST00000540537 TRIM49D1C9J1S8 452 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 POC1B-GALNT4F8VUJ3 575 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 HNRNPRO43390 633 aaKnown RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 PROM1O43490 865 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 DYRK3O43781 588 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 EEDO75530 441 aaKnown RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 AGAP20933 346 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 PTGER1P34995 402 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 RFC3P40938 356 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 GPR85P60893 370 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 FOLH1Q04609 750 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 C10orf62Q5T681 223 aaPredicted RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 C18orf63Q68DL7 685 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 XKRXQ6PP77 449 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 OR52B6Q8NGF0 335 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 RBM18Q96H35 190 aaKnown RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 SENP5Q96HI0 755 aaPredicted RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 ART5Q96L15 291 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 SERPINI1Q99574 410 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 MRPL57Q9BQC6 102 aaKnown RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 PELOQ9BRX2 385 aaKnown RBP19.44■□□□□ 0.7
CHFR-217ENST00000540537 DEPPQ9NTK1 212 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 ASB4Q9Y574 426 aa19.44■□□□□ 0.7
CHFR-217ENST00000540537 TMPRSS11DO60235 418 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 SEMA3DO95025 777 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 IGKV3-11P04433 115 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 FAM58BPP0C7Q3 252 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 ALOX15P16050 662 aaPredicted RBP19.43■□□□□ 0.7
CHFR-217ENST00000540537 ARL1P40616 181 aaPredicted RBP19.43■□□□□ 0.7
CHFR-217ENST00000540537 NEK2P51955 445 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 SMSP52788 366 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 MPEG1Q2M385 716 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 CMPK2Q5EBM0 449 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 CYP20A1Q6UW02 462 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 RTL4Q6ZR62 310 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 FGD2Q7Z6J4 655 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 NUDT13Q86X67 352 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 TICAM1Q8IUC6 712 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 ST13P4Q8IZP2 240 aaPredicted RBP19.43■□□□□ 0.7
CHFR-217ENST00000540537 UHMK1Q8TAS1 419 aaKnown RBP19.43■□□□□ 0.7
CHFR-217ENST00000540537 NUBPLQ8TB37 319 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 CDK15Q96Q40 435 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 MRPL46Q9H2W6 279 aaKnown RBP19.43■□□□□ 0.7
CHFR-217ENST00000540537 CREBBPQ92793 2442 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 ZNF407Q9C0G0 2248 aa19.43■□□□□ 0.7
CHFR-217ENST00000540537 DNAJC13O75165 2243 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 CACNA1CQ13936 2221 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 PRRG2O14669 202 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 HS6ST1O60243 411 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 PRKRAO75569 313 aaKnown RBP19.42■□□□□ 0.7
CHFR-217ENST00000540537 ABHD2P08910 425 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 NR2F6P10588 404 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 TRAF3Q13114 568 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 GGTA1PQ4G0N0 100 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 FRG2Q64ET8 278 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 OPN5Q6U736 354 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 DOLPP1Q86YN1 238 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 EID3Q8N140 333 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 GOLM1Q8NBJ4 401 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 KIF18AQ8NI77 898 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 AGAP11Q8TF27 550 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 PHF10Q8WUB8 498 aaKnown RBP19.42■□□□□ 0.7
CHFR-217ENST00000540537 SREK1Q8WXA9 508 aaKnown RBP19.42■□□□□ 0.7
CHFR-217ENST00000540537 MARVELD3Q96A59 401 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 FBXL20Q96IG2 436 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 SGCZQ96LD1 299 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 NSUN5Q96P11 429 aaKnown RBP19.42■□□□□ 0.7
CHFR-217ENST00000540537 FRG2BQ96QU4 278 aa19.42■□□□□ 0.7
CHFR-217ENST00000540537 WDR41Q9HAD4 459 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms