RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SLC30A8Q8IWU4 369 aa10.63□□□□□ -0.71
PBX1-212ENST00000540236 GMCL1P1Q8NEA9 526 aa10.63□□□□□ -0.71
PBX1-212ENST00000540236 UHRF1Q96T88 793 aaPredicted RBP10.63□□□□□ -0.71
PBX1-212ENST00000540236 EXO5Q9H790 373 aa10.63□□□□□ -0.71
PBX1-212ENST00000540236 POLE3Q9NRF9 147 aa10.63□□□□□ -0.71
PBX1-212ENST00000540236 HSPE1-MOB4S4R3N1 261 aa10.63□□□□□ -0.71
PBX1-212ENST00000540236 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 TVP23AA6NH52 213 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 AKAP8O43823 692 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 IGFBP1P08833 259 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 NTSP30990 170 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 VEGFCP49767 419 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HSD17B7P56937 341 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 RPS14P62263 151 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 TNFAIP8L2Q6P589 184 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 TCTE3Q8IZS6 198 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 CLECL1Q8IZS7 167 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 C2CD4AQ8NCU7 369 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 OR4K2Q8NGD2 314 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 CASTOR1Q8WTX7 329 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 CACNG3O60359 315 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 TUBG1P23258 451 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HMGCS2P54868 508 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 DPYSL2Q16555 572 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 NKG7Q16617 165 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 STPG2Q8N412 459 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 RNF175Q8N4F7 328 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 PMM1Q92871 262 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 SEMA3CQ99985 751 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 RPS6KB2Q9UBS0 482 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HIF3AQ9Y2N7 669 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 TIAM2Q8IVF5 1701 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 CCND3P30281 292 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 GPR15P49685 360 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HTRA4P83105 476 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 CNTN1Q12860 1018 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 XKR6Q5GH73 641 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 GCNT6Q5T4J0 391 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 TMUB2Q71RG4 321 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 RNF130Q86XS8 419 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ADGRG3Q86Y34 549 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 OR6K2Q8NGY2 324 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HMGCLL1Q8TB92 370 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 REPS1Q96D71 796 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 SLC38A2Q96QD8 506 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 YIPF4Q9BSR8 244 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ADGRE3Q9BY15 652 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 AGO3Q9H9G7 860 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ANXA2P2A6NMY6 339 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 PPEF2O14830 753 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 PRAMEF2O60811 474 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 HMGN1P05114 100 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 PPT1P50897 306 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 SLC35A2P78381 396 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 INSL4Q14641 139 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 FAM189A2Q15884 450 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 C9orf43Q8TAL5 461 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 ACOT11Q8WXI4 607 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 MTERF1Q99551 399 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 PELOQ9BRX2 385 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 POLR2J3Q9H1A7 115 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 KIF1AQ12756 1690 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 SLC19A2O60779 497 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 GJB3O75712 270 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 SNTB2Q13425 540 aaKnown RBP10.62□□□□□ -0.71
PBX1-212ENST00000540236 HTR4Q13639 388 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ZNF484Q5JVG2 852 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 ARMC10Q8N2F6 343 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 DNAJC22Q8N4W6 341 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 DNAAF1Q8NEP3 725 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 RAD51AP1Q96B01 352 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 PSORS1C1Q9UIG5 152 aa10.62□□□□□ -0.71
PBX1-212ENST00000540236 RFXAPO00287 272 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 MYL3P08590 195 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 ZNF286BP0CG31 522 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 EPB42P16452 691 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RGS19P49795 217 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PSMD4P55036 377 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 TAS2R41P59536 307 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 NFKB2Q00653 900 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 SLC25A52Q3SY17 297 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 TRNP1Q6NT89 227 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 FAM83AQ86UY5 434 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PLAC1Q9HBJ0 212 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 FADS1O60427 444 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 HCN1O60741 890 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 S100A10P60903 97 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PTGES3Q15185 160 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 ZNF578Q96N58 590 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms