RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 AGAP5A6NIR3 686 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 TMPRSS11DO60235 418 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 KCNK2O95069 426 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 XCR1P46094 333 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CLCNKAP51800 687 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 DCDC1P59894 354 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 TBCEQ15813 527 aaPredicted RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ZFP41Q8N8Y5 198 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PPP1R14BQ96C90 147 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 REPS1Q96D71 796 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CEP19Q96LK0 163 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 IMP3Q9NV31 184 aaKnown RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SEC14L3Q9UDX4 400 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ATP6V1HQ9UI12 483 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ENPP4Q9Y6X5 453 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CLDN24A6NM45 220 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TFECO14948 347 aaPredicted RBP12.98□□□□□ -0.33
BNIP3-202ENST00000540159 LCMT2O60294 686 aaKnown RBP12.98□□□□□ -0.33
BNIP3-202ENST00000540159 LILRB5O75023 590 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 UPK1BO75841 260 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 HSD3B1P14060 373 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 HSD3B2P26439 372 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 SOX9P48436 509 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 CRISP1P54107 249 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 KCNC4Q03721 635 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 MAP4K2Q12851 820 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 LIPKQ5VXJ0 399 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 C6orf120Q7Z4R8 191 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 ARMC8Q8IUR7 673 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 AMER2Q8N7J2 671 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TRMT61AQ96FX7 289 aaKnown RBP12.98□□□□□ -0.33
BNIP3-202ENST00000540159 SIAEQ9HAT2 523 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 DYRK4Q9NR20 520 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 KCNK6Q9Y257 313 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TBC1D3BA6NDS4 549 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 OR52A4PA6NMU1 304 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
BNIP3-202ENST00000540159 DNAJB5O75953 348 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 EPHX1P07099 455 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 ACP5P13686 325 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 ADRB3P13945 408 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 CD72P21854 359 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 CLEC12AQ5QGZ9 265 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 METTL4Q8N3J2 472 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 TSC22D4Q9Y3Q8 395 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 SPTBP11277 2137 aa12.98□□□□□ -0.33
BNIP3-202ENST00000540159 IGLON5A6NGN9 336 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 AP3D1O14617 1153 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SNPHO15079 494 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 GPX5O75715 221 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 CH25HO95992 272 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 ARAFP10398 606 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 BUD31P41223 144 aaPredicted RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 USP43Q70EL4 1123 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 OTULINQ96BN8 352 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 TRBV23OR9-2A0A075B6M9 112 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 TLR4O00206 839 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 PDPK1O15530 556 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 GABRB1P18505 474 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 CAV3P56539 151 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 EEF1A2Q05639 463 aaKnown RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 FCHO2Q0JRZ9 810 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 GPR19Q15760 415 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SSX1Q16384 188 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SLC7A13Q8TCU3 470 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SGPP1Q9BX95 441 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 NARSO43776 548 aaKnown RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 PAK4O96013 591 aaPredicted RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 ITGA2P17301 1181 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 MAT2AP31153 395 aaKnown RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SSTR4P31391 388 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 SELENBP1Q13228 472 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 LASP1Q14847 261 aaKnown RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 RASGRP3Q8IV61 690 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 MRPL43Q8N983 215 aaKnown RBP12.97□□□□□ -0.33
BNIP3-202ENST00000540159 COQ10AQ96MF6 247 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 CLN6Q9NWW5 311 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 WDR37Q9Y2I8 494 aa12.97□□□□□ -0.33
BNIP3-202ENST00000540159 LOC110117498-PIK3R3F6TDL0 507 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 QSOX1O00391 747 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 FHP07954 510 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 NR2F1P10589 423 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 CBLP22681 906 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 GRK3P35626 688 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 ZNF234Q14588 700 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 KCNJ8Q15842 424 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms