RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KRT78Q8N1N4 520 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 GPR32P1Q8NGA4 272 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 OR4D11Q8NGI4 311 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 OR5D16Q8NGK9 328 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 VMP1Q96GC9 406 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 OR5M11Q96RB7 305 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 TRPV4Q9HBA0 871 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 THSD1Q9NS62 852 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 SERGEFQ9UGK8 458 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 ENPP4Q9Y6X5 453 aa10.95□□□□□ -0.66
C11orf54-214ENST00000540113 USP34Q70CQ2 3546 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 C5orf58C9J3I9 102 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MID1O15344 667 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 NME6O75414 186 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 KRT75O95678 551 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 IFNW1P05000 195 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ADORA3P0DMS8 318 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CHMP24386 653 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CNR2P34972 360 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ERVK-21P61565 698 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CDK3Q00526 305 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 WSCD2Q2TBF2 565 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DEPDC1Q5TB30 811 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 REEP3Q6NUK4 255 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 C6orf120Q7Z4R8 191 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DSG4Q86SJ6 1040 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 COMTD1Q86VU5 262 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DCUN1D3Q8IWE4 304 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 LINC01555Q8NAE3 123 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 PSMA8Q8TAA3 256 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 SETD7Q8WTS6 366 aaKnown RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 JPH3Q8WXH2 748 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MYDGFQ969H8 173 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 YIPF4Q9BSR8 244 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MS4A8Q9BY19 250 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 C6orf62Q9GZU0 229 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 PALMDQ9NP74 551 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CTPS2Q9NRF8 586 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 OSGIN1Q9UJX0 560 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 HCN4Q9Y3Q4 1203 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 KRBA1A5PL33 1030 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 PDPK1O15530 556 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 KAT7O95251 611 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DNTTP04053 509 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ERGP11308 486 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ACP5P13686 325 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ITGA2P17301 1181 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DDCP20711 480 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MAGP20916 626 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CD72P21854 359 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 LIMS1P48059 325 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 RPS3AP61247 264 aaKnown RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 SYPL1Q16563 259 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ZNF750Q32MQ0 723 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 COLEC12Q5KU26 742 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 C10orf62Q5T681 223 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 AGBL4Q5VU57 503 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MEX3DQ86XN8 651 aaKnown RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 ARMC8Q8IUR7 673 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 NEURL2Q9BR09 285 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CHCHD6Q9BRQ6 235 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MENTQ9BUN1 341 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
C11orf54-214ENST00000540113 MIR1-1HGQ9H1L0 117 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 DSN1Q9H410 356 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 B3GNT3Q9Y2A9 372 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 HEATR5BQ9P2D3 2071 aa10.94□□□□□ -0.66
C11orf54-214ENST00000540113 A0A1W2PPV9 198 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 PRAMEF27A3QJZ7 478 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 CLDN24A6NM45 220 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 ANHXE9PGG2 379 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 CDH3P22223 829 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 CBLP22681 906 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 RPL3P39023 403 aaKnown RBP10.93□□□□□ -0.66
C11orf54-214ENST00000540113 SERPINB10P48595 397 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 PRKAG1P54619 331 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 RUNX3Q13761 415 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 MED22Q15528 200 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 ARMCX4Q5H9R4 360 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 PTCHD4Q6ZW05 846 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 UBE3DQ7Z6J8 389 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 LRRTM4Q86VH4 590 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 OR5K2Q8NHB8 316 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 UBE2E3Q969T4 207 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 RAB7BQ96AH8 199 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 FERD3LQ96RJ6 166 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 C17orf62Q9BQA9 187 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 KLHL31Q9H511 634 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 KCNK12Q9HB15 430 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 SIRT3Q9NTG7 399 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-214ENST00000540113 OBP2AQ9NY56 170 aa10.93□□□□□ -0.66
C11orf54-214ENST00000540113 GDE1Q9NZC3 331 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms