RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 EGLN2Q96KS0 407 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 CCT8L2Q96SF2 557 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 SOX17Q9H6I2 414 aaPredicted RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 MIEF1Q9NQG6 463 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 PRDM9Q9NQV7 894 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 PRTFDC1Q9NRG1 225 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 AIG1Q9NVV5 245 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 MKL2Q9ULH7 1088 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 PTRH2Q9Y3E5 179 aaKnown RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 PRMT3O60678 531 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 JRKO75564 520 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 LINGO3P0C6S8 592 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 NCF2P19878 526 aaPredicted RBP14.52□□□□□ -0.09
DDB1-216ENST00000539739 DDCP20711 480 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 PTPN4P29074 926 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 FOLR3P41439 243 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 HSD17B7P56937 341 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 SLC13A2Q13183 592 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 PTGR1Q14914 329 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 TGIF1Q15583 401 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 CCDC92Q53HC0 331 aaPredicted RBP14.52□□□□□ -0.09
DDB1-216ENST00000539739 OR52E8Q6IFG1 317 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 QSOX2Q6ZRP7 698 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 R3HCC1LQ7Z5L2 792 aaKnown RBP14.52□□□□□ -0.09
DDB1-216ENST00000539739 C7orf57Q8NEG2 295 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 OR2Y1Q8NGV0 311 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 CLHC1Q8NHS4 586 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 SNIP1Q8TAD8 396 aaKnown RBP14.52□□□□□ -0.09
DDB1-216ENST00000539739 KCNE4Q8WWG9 221 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 STARD8Q92502 1023 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 GATA6Q92908 595 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 CATSPER2Q96P56 530 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 SPSB2Q99619 263 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 CRB3Q9BUF7 120 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 DPY30Q9C005 99 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 BRINP2Q9C0B6 783 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 GPN2Q9H9Y4 310 aaPredicted RBP14.52□□□□□ -0.09
DDB1-216ENST00000539739 LANCL2Q9NS86 450 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 MMACHCQ9Y4U1 282 aa14.52□□□□□ -0.09
DDB1-216ENST00000539739 NCOR2Q9Y618 2525 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 GLOD5A6NK44 160 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 PGRMC2O15173 223 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 AKAP10O43572 662 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 CTNSO60931 367 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 CNOT3O75175 753 aaKnown RBP14.51□□□□□ -0.09
DDB1-216ENST00000539739 LRATO95237 230 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 CYC1P08574 325 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 RPSAP08865 295 aaKnown RBP14.51□□□□□ -0.09
DDB1-216ENST00000539739 PRPS1L1P21108 318 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 HPCAL1P37235 193 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 EMP2P54851 167 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 CLDN8P56748 225 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 RIPOR1Q6ZS17 1223 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 SHISA6Q6ZSJ9 500 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 SHISA5Q8N114 240 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 GFM2Q969S9 779 aaKnown RBP14.51□□□□□ -0.09
DDB1-216ENST00000539739 MARK4Q96L34 752 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 PTCHD1Q96NR3 888 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 PRPF18Q99633 342 aaKnown RBP14.51□□□□□ -0.09
DDB1-216ENST00000539739 VN1R1Q9GZP7 353 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 REEP4Q9H6H4 257 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 MRGBPQ9NV56 204 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 EHD3Q9NZN3 535 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 HEY2Q9UBP5 337 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 C3orf18Q9UK00 162 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 TCFL5Q9UL49 500 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 PCDHGA6Q9Y5G7 932 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 GPR45Q9Y5Y3 372 aa14.51□□□□□ -0.09
DDB1-216ENST00000539739 SYNDIG1LA6NDD5 238 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 IDSB3KWA1 339 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 TERTO14746 1132 aaKnown RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 PRKRAO75569 313 aaKnown RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 KLF7O75840 302 aaPredicted RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 HNRNPFP52597 415 aaKnown RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 MC1RQ01726 317 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 STX4Q12846 297 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 CLN3Q13286 438 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 BIKQ13323 160 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 MYBPC3Q14896 1274 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 PDCD4Q53EL6 469 aaKnown RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 SLC48A1Q6P1K1 146 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 PIGWQ7Z7B1 504 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 CLNKQ7Z7G1 428 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 LAPTM4BQ86VI4 370 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 MIER2Q8N344 545 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 TMEM52Q8NDY8 209 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 PLPP5Q8NEB5 264 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 OR4K14Q8NGD5 310 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 DNAJB14Q8TBM8 379 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 METTL21AQ8WXB1 218 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 MTERF3Q96E29 417 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 NAF1Q96HR8 494 aaKnown RBP14.5□□□□□ -0.09
DDB1-216ENST00000539739 ZBTB18Q99592 522 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 ARPC5LQ9BPX5 153 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 DPH1Q9BZG8 443 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 ACTL8Q9H568 366 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 SEMA3GQ9NS98 782 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 GIMAP4Q9NUV9 329 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 CEP295Q9C0D2 2601 aa14.5□□□□□ -0.09
DDB1-216ENST00000539739 PCDH17O14917 1159 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms