RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 MILR1Q7Z6M3 343 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 SIAH3Q8IW03 269 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ST13P4Q8IZP2 240 aaPredicted RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 TMEM151AQ8N4L1 468 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 OR5L2Q8NGL0 311 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.75□□□□□ -0.69
RTN3-209ENST00000538995 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 DGAT2Q96PD7 388 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 CDK15Q96Q40 435 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ERVK-6Q9BXR3 956 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 OR8D2Q9GZM6 311 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 EPB41L4BQ9H329 900 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ELOVL6Q9H5J4 265 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 WDR41Q9HAD4 459 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 AHSPQ9NZD4 102 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 MYOTQ9UBF9 498 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ADAM29Q9UKF5 820 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ATG4BQ9Y4P1 393 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ASB4Q9Y574 426 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 NBPF19A0A087WUL8 3843 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 TMEM200CA6NKL6 621 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 A8MVJ9 347 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 KLRC4-KLRK1H3BQV0 150 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 TMPRSS11DO60235 418 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 PRKNO60260 465 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 OR2J2O76002 312 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 IGKV3-11P04433 115 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 FAM58BPP0C7Q3 252 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 ALOX15P16050 662 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 TNNI3P19429 210 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 ATP5F1P24539 256 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 GALNSP34059 522 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 NEK2P51955 445 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 CASP6P55212 293 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 ID2Q02363 134 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 FOLH1Q04609 750 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 SPRED3Q2MJR0 410 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 OR52E8Q6IFG1 317 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 BNC2Q6ZN30 1099 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 SLC22A9Q8IVM8 553 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 OR4F6Q8NGB9 312 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 NUBPLQ8TB37 319 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 ZNF721Q8TF20 911 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 ASB15Q8WXK1 588 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 RBM18Q96H35 190 aaKnown RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 FBXL20Q96IG2 436 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 RASL10BQ96S79 203 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 BRF2Q9HAW0 419 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 TIMMDC1Q9NPL8 285 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
RTN3-209ENST00000538995 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.74□□□□□ -0.69
RTN3-209ENST00000538995 HPF1Q9NWY4 346 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 TRPS1Q9UHF7 1281 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 SNX6Q9UNH7 406 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
RTN3-209ENST00000538995 A0A1W2PR48 441 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 SLC19A2O60779 497 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 GPR75O95800 540 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 AIFM1O95831 613 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 CLDN1O95832 211 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 HSD3B1P14060 373 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 HSD3B2P26439 372 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 CA7P43166 264 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 ST13P50502 369 aaKnown RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 HK2P52789 917 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 RNF4P78317 190 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 RASA2Q15283 850 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 ZNF678Q5SXM1 525 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 C1QL3Q5VWW1 255 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 C18orf63Q68DL7 685 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 LETMD1Q6P1Q0 360 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 Q6ZPB1 254 aaPredicted RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 FJX1Q86VR8 437 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 GHDCQ8N2G8 530 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 CPSF7Q8N684 471 aaKnown RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 ZFP62Q8NB50 900 aaPredicted RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 GOLM1Q8NBJ4 401 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 PSD4Q8NDX1 1056 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 MZB1Q8WU39 189 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 SENP5Q96HI0 755 aaPredicted RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 SGCZQ96LD1 299 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 ZNF382Q96SR6 550 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 NMRK1Q9NWW6 199 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 TMEM216Q9P0N5 145 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 SUCOQ9UBS9 1254 aaKnown RBP10.73□□□□□ -0.69
RTN3-209ENST00000538995 ERVK-11Q9UQG0 969 aa10.73□□□□□ -0.69
RTN3-209ENST00000538995 TRGV8A0A0C4DH27 118 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 MYOCOSA0A1B0GUC4 107 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 ARHGAP10A1A4S6 786 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 A1L4Q6 167 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 OR6C76A6NM76 312 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 NPIPA5E9PKD4 350 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 ASNA1O43681 348 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 PEX1O43933 1283 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 OR10H2O60403 315 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 DLX3O60479 287 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms