RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ADORA3P0DMS8 318 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SOX9P48436 509 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 LIMK1P53667 647 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CDC42P60953 191 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 TSTA3Q13630 321 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CLPPQ16740 277 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF181Q2M3W8 571 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 POM121L1PQ3SYA9 428 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 NATD1Q8N6N6 113 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PRSS33Q8NF86 280 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CDCA4Q9BXL8 241 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 TRIM39Q9HCM9 518 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CNOT2Q9NZN8 540 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ACSL6Q9UKU0 697 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 WBP11Q9Y2W2 641 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 WNT6Q9Y6F9 365 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 DMDP11532 3685 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CACNA1IQ9P0X4 2223 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 VPS13AQ96RL7 3174 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 TRBC2A0A5B9 178 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 AGAP5A6NIR3 686 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SHISA7A6NL88 538 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 J3KTA2 159 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SLC9A3R1O14745 358 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CNOT3O75175 753 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 CISD3P0C7P0 127 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ACADLP28330 430 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 RGS6P49758 472 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 DSTNP60981 165 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF45Q02386 682 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 DNASE1L3Q13609 305 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PTGES3Q15185 160 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PRSS53Q2L4Q9 553 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 INAVAQ3KP66 663 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ARMCX4Q5H9R4 360 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 REEP3Q6NUK4 255 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 LCTLQ6UWM7 567 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF367Q7RTV3 350 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
CDCA3-207ENST00000538862 TRAPPC5Q8IUR0 188 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 OR9Q2Q8NGE9 314 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 WFIKKN2Q8TEU8 576 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 PDXPQ96GD0 296 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 NLNQ9BYT8 704 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SLC6A16Q9GZN6 736 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 SPNS1Q9H2V7 528 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 AHSPQ9NZD4 102 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 GPR34Q9UPC5 381 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ITM2BQ9Y287 266 aa13.84□□□□□ -0.19
CDCA3-207ENST00000538862 ZAR1LA6NP61 321 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 TBX19O60806 448 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 PRNPP04156 253 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 IFNW1P05000 195 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 IL3P08700 152 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 SOAT1P35610 550 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 NUDT6P53370 316 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 STARD6P59095 220 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 ST8SIA6P61647 398 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 SLC22A16Q86VW1 577 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 LYSMD2Q8IV50 215 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 KRT78Q8N1N4 520 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 OR5AK3PQ8NH89 298 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 CPNE5Q9HCH3 593 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 MS4A12Q9NXJ0 267 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 TAAR2Q9P1P5 351 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 KCND3Q9UK17 655 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 RAB23Q9ULC3 237 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
CDCA3-207ENST00000538862 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SPINT1O43278 529 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 AQP9O43315 295 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PTHP01270 115 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 GLULP15104 373 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 WEE1P30291 646 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 GPR1P46091 355 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 ALDH9A1P49189 494 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CRISP1P54107 249 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 PRKCDQ05655 676 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 DPTQ07507 201 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 FAM92BQ6ZTR7 304 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SLC9B2Q86UD5 537 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 SLC44A2Q8IWA5 706 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-207ENST00000538862 B3GNT7Q8NFL0 401 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 OR2L2Q8NH16 312 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 NUS1Q96E22 293 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CDADC1Q9BWV3 514 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 INIPQ9NRY2 104 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 CLN6Q9NWW5 311 aa13.82□□□□□ -0.2
CDCA3-207ENST00000538862 OBP2AQ9NY56 170 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms