RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 CLHC1Q8NHS4 586 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 UCN3Q969E3 161 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 RILPQ96NA2 401 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 TSSK3Q96PN8 268 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 CCT8L2Q96SF2 557 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 YIPF2Q9BWQ6 316 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 FAIM2Q9BWQ8 316 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 DPH1Q9BZG8 443 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 VN1R1Q9GZP7 353 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 FAM107BQ9H098 131 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 CCDC86Q9H6F5 360 aaKnown RBP7.55□□□□□ -1.2
CIT-209ENST00000538073 REEP4Q9H6H4 257 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
CIT-209ENST00000538073 WDR41Q9HAD4 459 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 SDR39U1Q9NRG7 319 aaPredicted RBP7.55□□□□□ -1.2
CIT-209ENST00000538073 EHD3Q9NZN3 535 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 KCND3Q9UK17 655 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 TCFL5Q9UL49 500 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 MAPRE3Q9UPY8 281 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
CIT-209ENST00000538073 MMACHCQ9Y4U1 282 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 ZZEF1O43149 2961 aa7.55□□□□□ -1.2
CIT-209ENST00000538073 ZFHX4Q86UP3 3567 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CCDC88CQ9P219 2028 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 A0A1W2PQ72 361 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 TCRBV16S1A1N1A0A5B0 115 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 OR2W5A6NFC9 320 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 GLOD5A6NK44 160 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 WASHC1A8K0Z3 465 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 GABRR3A8MPY1 467 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CLDN4O14493 209 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 PCDH17O14917 1159 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 SCAMP2O15127 329 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 FGF17O60258 216 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 B4GALT2O60909 372 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CDC123O75794 336 aaPredicted RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 GPR75O95800 540 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 IGHEP01854 428 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 UMODP07911 640 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 LIFP15018 202 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 GPX3P22352 226 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 PPP2R1BP30154 601 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 ZFP36L2P47974 494 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 FOXL2P58012 376 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 RPS15P62841 145 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 BTG2P78543 158 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
CIT-209ENST00000538073 BIKQ13323 160 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 UGT8Q16880 541 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CPZQ66K79 652 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 TMEM205Q6UW68 189 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 SHISA6Q6ZSJ9 500 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 R3HCC1LQ7Z5L2 792 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 CAMKMTQ7Z624 323 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CPSF7Q8N684 471 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 KRTCAP2Q8N6L1 136 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CDC26Q8NHZ8 85 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 ADAMTS17Q8TE56 1095 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 KCNE4Q8WWG9 221 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 GFM2Q969S9 779 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 NACC2Q96BF6 587 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 ANKRD9Q96BM1 317 aaPredicted RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 TESCQ96BS2 214 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 MARK4Q96L34 752 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 TEX37Q96LM6 180 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CATSPER2Q96P56 530 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 EFHD1Q9BUP0 239 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 RBCK1Q9BYM8 510 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 DPY30Q9C005 99 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 CLMPQ9H6B4 373 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 SEMA3GQ9NS98 782 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 TMEM45AQ9NWC5 275 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 ZIM2Q9NZV7 527 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 ATP6V1HQ9UI12 483 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 C3orf18Q9UK00 162 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 MKL2Q9ULH7 1088 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 TRIM33Q9UPN9 1127 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 PADI2Q9Y2J8 665 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 PTRH2Q9Y3E5 179 aaKnown RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 USP24Q9UPU5 2620 aa7.54□□□□□ -1.2
CIT-209ENST00000538073 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
CIT-209ENST00000538073 SCN2AQ99250 2005 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 SYNDIG1LA6NDD5 238 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 MYO1GB0I1T2 1018 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 AKAP10O43572 662 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 LDB3O75112 727 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 ALOX12BO75342 701 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 SLC22A3O75751 556 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 LRATO95237 230 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 HEXBP07686 556 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 NCF2P19878 526 aaPredicted RBP7.53□□□□□ -1.2
CIT-209ENST00000538073 MAOAP21397 527 aa7.53□□□□□ -1.2
CIT-209ENST00000538073 MMP11P24347 488 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms