RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF624Q9P2J8 865 aaPredicted RBP8.16□□□□□ -1.1
SRGAP1-202ENST00000537556 CRYL1Q9Y2S2 319 aa8.16□□□□□ -1.1
SRGAP1-202ENST00000537556 AAR2Q9Y312 384 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-202ENST00000537556 LSM2Q9Y333 95 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-202ENST00000537556 MCRIP1C9JLW8 97 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 KIAA0355O15063 1070 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 CSO75390 466 aaKnown RBP8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 STBD1O95210 358 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 SIX6O95475 246 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 GLP2RO95838 553 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 NFICP08651 508 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 TYRP14679 529 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 CXCL2P19875 107 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 CTSCP53634 463 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 VLDLRP98155 873 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 DGKZQ13574 1117 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 EXOC3L2Q2M3D2 409 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 ATP13A5Q4VNC0 1218 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 C9orf152Q5JTZ5 239 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 LIPKQ5VXJ0 399 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 DEF8Q6ZN54 512 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 TSPAN33Q86UF1 283 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 RYBPQ8N488 228 aaPredicted RBP8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 THAP6Q8TBB0 222 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 PABPC5Q96DU9 382 aaKnown RBP8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 HS6ST2Q96MM7 605 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 PRKD2Q9BZL6 878 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 ENKD1Q9H0I2 346 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 RNF19AQ9NV58 838 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 BACE2Q9Y5Z0 518 aa8.15□□□□□ -1.1
SRGAP1-202ENST00000537556 A0A0U1RQF3 1178 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 CASKO14936 926 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC28A2O43868 658 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 CILPO75339 1184 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 NUDT7P0C024 238 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 GABRA1P14867 456 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 CTBP2P56545 445 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 CACNB2Q08289 660 aaPredicted RBP8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 ILKQ13418 452 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 MTMR1Q13613 665 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 ST3GAL2Q16842 350 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 GSG1Q2KHT4 349 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 SEZ6Q53EL9 994 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 RGMBQ6NW40 437 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 UQCC3Q6UW78 93 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 LCLAT1Q6UWP7 414 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 LDLRAD3Q86YD5 345 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 NETO2Q8NC67 525 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 BPIFCQ8NFQ6 507 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 OR52K2Q8NGK3 314 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 RNF139Q8WU17 664 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 FEVQ99581 238 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 MAGEB5Q9BZ81 275 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 ELOVL4Q9GZR5 314 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 TFB2MQ9H5Q4 396 aaKnown RBP8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 TDRD3Q9H7E2 651 aaKnown RBP8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 PPP4R1LQ9P1A2 415 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 UBQLN1Q9UMX0 589 aaKnown RBP8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 PCDHB7Q9Y5E2 793 aa8.15□□□□□ -1.11
SRGAP1-202ENST00000537556 LRRC14BA6NHZ5 514 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 G3V3Q6 166 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 J3KR12 359 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 WNT9AO14904 365 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC7A4O43246 635 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PRAMEF2O60811 474 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 TFP02787 698 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CHRM5P08912 532 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 HOXB8P17481 243 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC1A3P43003 542 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ASMTP46597 345 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SCIMPQ6UWF3 145 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ZPBP2Q6X784 338 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PTCHD4Q6ZW05 846 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 FBXO39Q8N4B4 442 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 OR52P1PQ8NH57 321 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 RPLP0P6Q8NHW5 317 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CNOT9Q92600 299 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 C12orf42Q96LP6 360 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ELAC1Q9H777 363 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC25A37Q9NYZ2 338 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 TSPAN16Q9UKR8 245 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC9A8Q9Y2E8 581 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 OR6C68A6NDL8 312 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 C1orf196B1AJZ1 125 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF879B4DU55 563 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PRR23D1E9PI22 279 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 E9PI62 339 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PRR23D2P0DMB1 279 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 DRD2P14416 443 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CD1DP15813 335 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 AHCYP23526 432 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 AVPR1BP47901 424 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 DCDP81605 110 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms