RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 VMP1Q96GC9 406 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 KLHL1Q9NR64 748 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 LYARQ9NX58 379 aaKnown RBP12.26□□□□□ -0.45
PRKDC-206ENST00000536429 MS4A12Q9NXJ0 267 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 LGALS13Q9UHV8 139 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 GRID1Q9ULK0 1009 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 SNX6Q9UNH7 406 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CLCA3PQ9Y6N3 262 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CPAMD8Q8IZJ3 1885 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CLEC18AA5D8T8 446 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 NEURL1O76050 574 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 MLYCDO95822 493 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 NR2F6P10588 404 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CPA3P15088 417 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 TNNI3P19429 210 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 STT3AP46977 705 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 OC90Q02509 493 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-206ENST00000536429 IFFO1Q0D2I5 559 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 SERTAD2Q14140 314 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF750Q32MQ0 723 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CCDC153Q494R4 210 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF324BQ6AW86 544 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CLEC18BQ6UXF7 455 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 C10orf107Q8IVU9 208 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 LGI4Q8N135 537 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 ARMC10Q8N2F6 343 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 TMEM132CQ8N3T6 1108 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 BANPQ8N9N5 519 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CCDC63Q8NA47 563 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 CLEC18CQ8NCF0 446 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 OR14A16Q8NHC5 309 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 METTL6Q8TCB7 284 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 SLC2A12Q8TD20 617 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 FAR1Q8WVX9 515 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 TANKQ92844 425 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 UTP23Q9BRU9 249 aaKnown RBP12.25□□□□□ -0.45
PRKDC-206ENST00000536429 SLC29A3Q9BZD2 475 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 ACPTQ9BZG2 426 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 SHCBP1LQ9BZQ2 653 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 OR8D2Q9GZM6 311 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 MID1IP1Q9NPA3 183 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 RAB21Q9UL25 225 aa12.25□□□□□ -0.45
PRKDC-206ENST00000536429 BLACEA4D250 179 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF354AO60765 605 aaPredicted RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SPAG7O75391 227 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ZFAND5O76080 213 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ESRRBO95718 433 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 RNF224P0DH78 156 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ALOX15P16050 662 aaPredicted RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SERPINB3P29508 390 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 HMOX2P30519 316 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 BUD31P41223 144 aaPredicted RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 PKNOX1P55347 436 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 DNAJB13P59910 316 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 HMGCS1Q01581 520 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 POLEQ07864 2286 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 PCLAFQ15004 111 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 CCNYL2Q5T2Q4 361 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 C10orf62Q5T681 223 aaPredicted RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 NDUFAF5Q5TEU4 345 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 FRMD7Q6ZUT3 714 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SRRM1Q8IYB3 904 aaKnown RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 CNPY4Q8N129 248 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 RIBC1Q8N443 379 aaPredicted RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 MREGQ8N565 214 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 C1orf52Q8N6N3 182 aaKnown RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 MORN4Q8NDC4 146 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF721Q8TF20 911 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 DAZLQ92904 295 aaKnown RBP12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SCMH1Q96GD3 660 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 DGAT2Q96PD7 388 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 BRF2Q9HAW0 419 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 OXSMQ9NWU1 459 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 MKS1Q9NXB0 559 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 LRFN1Q9P244 771 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 ABI3Q9P2A4 366 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 SLC17A7Q9P2U7 560 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 PLLPQ9Y342 182 aa12.24□□□□□ -0.45
PRKDC-206ENST00000536429 PTPN13Q12923 2485 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ESPL1Q14674 2120 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ANKUB1A6NFN9 424 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 WWP2O00308 870 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SEMA7AO75326 666 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ULK1O75385 1050 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ITGA10O75578 1167 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 RASAL1O95294 804 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 GPR75O95800 540 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 KRT6AP02538 564 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 KRT6BP04259 564 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 IGKV3-11P04433 115 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 MST1P26927 711 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 TLX1P31314 330 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 TRHRP34981 398 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 PTGER1P34995 402 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 KRT6CP48668 564 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 TDGF1P3P51864 188 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms