RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PAGE2Q7Z2X7 111 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 RBMXL3Q8N7X1 1067 aaKnown RBP16.71■□□□□ 0.27
DDX55-204ENST00000536079 ZNF781Q8N8C0 355 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 PPP1R14CQ8TAE6 165 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 M1APQ8TC57 530 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 TWIST2Q8WVJ9 160 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 TANKQ92844 425 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 EML4Q9HC35 981 aaKnown RBP16.71■□□□□ 0.27
DDX55-204ENST00000536079 NMRK1Q9NWW6 199 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 VTI1BQ9UEU0 232 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 MCM8Q9UJA3 840 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 CES1P1Q9UKY3 287 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 PCDHA9Q9Y5H5 950 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 HRKO00198 91 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 RSL1D1O76021 490 aaKnown RBP16.7■□□□□ 0.26
DDX55-204ENST00000536079 IFNA16P05015 189 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 SFTPCP11686 197 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 TIA1P31483 386 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX55-204ENST00000536079 SERPINB5P36952 375 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
DDX55-204ENST00000536079 SLC1A6P48664 564 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 DUSP2Q05923 314 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 BST1Q10588 318 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 STX4Q12846 297 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 IMPG1Q17R60 797 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 FAM180BQ6P0A1 224 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 GALNT18Q6P9A2 607 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 LINC00696Q6ZRV3 163 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 APCDD1LQ8NCL9 501 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 ELP5Q8TE02 316 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 C16orf78Q8WTQ4 265 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 SREK1Q8WXA9 508 aaKnown RBP16.7■□□□□ 0.26
DDX55-204ENST00000536079 MFRPQ9BY79 579 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 MMP25Q9NPA2 562 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 SIRT5Q9NXA8 310 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 PLA2G3Q9NZ20 509 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
DDX55-204ENST00000536079 CFAP46Q8IYW2 2715 aa16.7■□□□□ 0.26
DDX55-204ENST00000536079 TLN1Q9Y490 2541 aaKnown RBP16.7■□□□□ 0.26
DDX55-204ENST00000536079 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 A8MUI8 341 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 TMEM114B3SHH9 223 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 PRKNO60260 465 aaPredicted RBP16.69■□□□□ 0.26
DDX55-204ENST00000536079 HSPA4LO95757 839 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 GPR75O95800 540 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 DDAH2O95865 285 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 F10P00742 488 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 UQCRHP07919 91 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 IL3P08700 152 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 TACR1P25103 407 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
DDX55-204ENST00000536079 PTGER1P34995 402 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 TAS2R50P59544 299 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 ACSM2AQ08AH3 577 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 STX3Q13277 289 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 EXT1Q16394 746 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 AGAP7PQ5VUJ5 663 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 ACSM2BQ68CK6 577 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 H3F3CQ6NXT2 135 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 IGFL2Q6UWQ7 119 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 RNF165Q6ZSG1 346 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 AGAP4Q96P64 663 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 ADAP2Q9NPF8 381 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 PNPOQ9NVS9 261 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 PPIEQ9UNP9 301 aaKnown RBP16.69■□□□□ 0.26
DDX55-204ENST00000536079 EXO1Q9UQ84 846 aaKnown RBP16.69■□□□□ 0.26
DDX55-204ENST00000536079 DLGAP4Q9Y2H0 992 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 ZNF451Q9Y4E5 1061 aa16.69■□□□□ 0.26
DDX55-204ENST00000536079 SPENQ96T58 3664 aaKnown RBP16.68■□□□□ 0.26
DDX55-204ENST00000536079 BLACEA4D250 179 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 C17orf105B2RV13 164 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 NPIPB8E9PQR5 432 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 SLC28A1O00337 649 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 LSM1O15116 133 aaKnown RBP16.68■□□□□ 0.26
DDX55-204ENST00000536079 SKAP2O75563 359 aaPredicted RBP16.68■□□□□ 0.26
DDX55-204ENST00000536079 ICAM2P13598 275 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 PRPH2P23942 346 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 STT3AP46977 705 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 SERTAD2Q14140 314 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 ELAVL1Q15717 326 aaKnown RBP16.68■□□□□ 0.26
DDX55-204ENST00000536079 RFTN2Q52LD8 501 aaPredicted RBP16.68■□□□□ 0.26
DDX55-204ENST00000536079 XKR7Q5GH72 579 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 DDIASQ8IXT1 998 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDX55-204ENST00000536079 NCLNQ969V3 563 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 LRTM1Q9HBL6 345 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 NKIRAS1Q9NYS0 192 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 LUZP4Q9P127 313 aa16.68■□□□□ 0.26
DDX55-204ENST00000536079 ATP6AP2A0A1C7CYW4 349 aa16.67■□□□□ 0.26
DDX55-204ENST00000536079 GNG14A0A1W2PPG7 69 aa16.67■□□□□ 0.26
DDX55-204ENST00000536079 SEC22BO75396 215 aa16.67■□□□□ 0.26
DDX55-204ENST00000536079 ATP6AP2O75787 350 aa16.67■□□□□ 0.26
DDX55-204ENST00000536079 ANXA4P09525 319 aaPredicted RBP16.67■□□□□ 0.26
DDX55-204ENST00000536079 NEFHP12036 1026 aa16.67■□□□□ 0.26
DDX55-204ENST00000536079 ALOX15P16050 662 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms