RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 ERICH5Q6P6B1 374 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 GPR155Q7Z3F1 870 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CCDC190Q86UF4 302 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SIX5Q8N196 739 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF557Q8N988 423 aaPredicted RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 OR5AR1Q8NGP9 310 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC9A6Q92581 669 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ZG16BQ96DA0 208 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TRMT61BQ9BVS5 477 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SEMA3GQ9NS98 782 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TAAR2Q9P1P5 351 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 V9GYH0 126 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 OR6C70A6NIJ9 312 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 IFNW1P05000 195 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 SYPP08247 313 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 PSKH1P11801 424 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 NPPBP16860 134 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 CBLP22681 906 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 DEFA1P59665 94 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 DEFA3P59666 94 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF91Q05481 1191 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 SPHARQ15513 63 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 CCDC58Q4VC31 144 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 FAM26DQ5JW98 314 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 AP2M1Q96CW1 435 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 REEP4Q9H6H4 257 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 FUT1P19526 365 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 EPHB3P54753 998 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 MANFP55145 182 aaKnown RBP13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 TUBA1BP68363 451 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 DEFB103AP81534 67 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 MED27Q6P2C8 311 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 GDPD4Q6W3E5 623 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 TUBA1AQ71U36 451 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 SPRED2Q7Z698 418 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 IQCHQ86VS3 1027 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 BBS10Q8TAM1 723 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 RAET1EQ8TD07 263 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 CHTF18Q8WVB6 975 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 BEX1Q9HBH7 125 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
LPCAT3-203ENST00000535479 ANAPC1Q9H1A4 1944 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 LOC102723532A0A0G2JNH3 316 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 FAM183AA6NL82 134 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 CENPXA8MT69 81 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 ERAL1O75616 437 aaKnown RBP13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 SLITRK5O94991 958 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 PTTG1O95997 202 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 FURINP09958 794 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 XCR1P46094 333 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 XKP51811 444 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF763Q0D2J5 394 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 CRTC2Q53ET0 693 aaPredicted RBP13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 SLCO4C1Q6ZQN7 724 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 UBQLNLQ8IYU4 475 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 LRR1Q96L50 414 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 POLR2J3Q9H1A7 115 aaKnown RBP13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 FTSJ1Q9UET6 329 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 ERVW-1Q9UQF0 538 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 KCNE2Q9Y6J6 123 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 HSPE1-MOB4S4R3N1 261 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.29
LPCAT3-203ENST00000535479 FABP12A6NFH5 140 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CD8B2A6NJW9 211 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 H7BY64 318 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 SLC28A2O43868 658 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 DNAJB5O75953 348 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CCNYL3P0C7X3 344 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CD8BP10966 210 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CD72P21854 359 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 BUD31P41223 144 aaPredicted RBP13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CRYBB2P43320 205 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 DSTNP60981 165 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 CDC20Q12834 499 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 VEZF1Q14119 521 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 LY6G5CQ5SRR4 150 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 UNC5DQ6UXZ4 953 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 ASB18Q6ZVZ8 466 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 PDZD3Q86UT5 571 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 ADGRF3Q8IZF5 1079 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 TM9SF4Q92544 642 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 MIXL1Q9H2W2 232 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 NLKQ9UBE8 527 aa13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 NDRG2Q9UN36 371 aaKnown RBP13.21□□□□□ -0.3
LPCAT3-203ENST00000535479 NPC1O15118 1278 aa13.2□□□□□ -0.3
LPCAT3-203ENST00000535479 PSIP1O75475 530 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms