RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 NDUFAF5Q5TEU4 345 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 LINC00696Q6ZRV3 163 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 Q6ZSR9 355 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 KBTBD2Q8IY47 623 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 PPWD1Q96BP3 646 aaKnown RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 TM4SF18Q96CE8 201 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 NPAS2Q99743 824 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 LHPPQ9H008 270 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 SLC25A18Q9H1K4 315 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 NKIRAS1Q9NYS0 192 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 ADAM29Q9UKF5 820 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 DLGAP4Q9Y2H0 992 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 EML6Q6ZMW3 1958 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 SERTM1A2A2V5 107 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 CTNSO60931 367 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 IFNA16P05015 189 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 SERPINA7P05543 415 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 TACR1P25103 407 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 SERPINB5P36952 375 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 TAS2R50P59544 299 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 IGLV3-21P80748 117 aaPredicted RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 STX4Q12846 297 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 STX3Q13277 289 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 PRSS53Q2L4Q9 553 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 SPIN4Q56A73 249 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 XKR7Q5GH72 579 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 VWA5B1Q5TIE3 1220 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 OR52E8Q6IFG1 317 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 CLYBLQ8N0X4 340 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 NFAM1Q8NET5 270 aaPredicted RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 DNAJB14Q8TBM8 379 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 WBP1Q96G27 269 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 EML4Q9HC35 981 aaKnown RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 ADAP2Q9NPF8 381 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 PNPOQ9NVS9 261 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 MARCOQ9UEW3 520 aaPredicted RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 MCM8Q9UJA3 840 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
VPS11-205ENST00000534551 PCDHGA9Q9Y5G4 932 aaKnown RBP13.1□□□□□ -0.31
VPS11-205ENST00000534551 TRBV11-1A0A0K0K1C0 115 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 SLC28A1O00337 649 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 PCDH17O14917 1159 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
VPS11-205ENST00000534551 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
VPS11-205ENST00000534551 FGF4P08620 206 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 SLC18A1P54219 525 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 SOX8P57073 446 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 KIAA0040Q15053 153 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 NADK2Q4G0N4 442 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 TCTN3Q6NUS6 607 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
VPS11-205ENST00000534551 ZNF843Q8N446 348 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 RBMXL3Q8N7X1 1067 aaKnown RBP13.09□□□□□ -0.31
VPS11-205ENST00000534551 GOLGA6L1Q8N7Z2 621 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 CLHC1Q8NHS4 586 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 NCLNQ969V3 563 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 C19orf60Q96EN9 201 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 KCNK13Q9HB14 408 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 MMP25Q9NPA2 562 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
VPS11-205ENST00000534551 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 SPTA1P02549 2419 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 A8MUI8 341 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
VPS11-205ENST00000534551 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 RGS14O43566 566 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 DDAH2O95865 285 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 CHEK2O96017 543 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 ANXA4P09525 319 aaPredicted RBP13.08□□□□□ -0.32
VPS11-205ENST00000534551 SDC1P18827 310 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 PRPH2P23942 346 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
VPS11-205ENST00000534551 SOX11P35716 441 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 STT3AP46977 705 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 ELAVL1Q15717 326 aaKnown RBP13.08□□□□□ -0.32
VPS11-205ENST00000534551 EXT1Q16394 746 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
VPS11-205ENST00000534551 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 NOXRED1Q6NXP6 359 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 RNF165Q6ZSG1 346 aa13.08□□□□□ -0.32
VPS11-205ENST00000534551 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms