RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF285Q96NJ3 590 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 OLFM1Q99784 485 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 AGPAT1Q99943 283 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 SH3GL2Q99962 352 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 SELENOSQ9BQE4 189 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 CCM2Q9BSQ5 444 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 TUBB6Q9BUF5 446 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 MRI1Q9BV20 369 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 ADGRE3Q9BY15 652 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 VN1R1Q9GZP7 353 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 CHRNA10Q9GZZ6 450 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 QRSL1Q9H0R6 528 aaKnown RBP2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 THAP2Q9H0W7 228 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 GANQ9H2C0 597 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 NDST4Q9H3R1 872 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 MVB12BQ9H7P6 319 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 COG4Q9H9E3 785 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 LIN28AQ9H9Z2 209 aaKnown RBP2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 MOCS1Q9NZB8 636 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 C6orf203Q9P0P8 240 aaPredicted RBP2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 ACAD8Q9UKU7 415 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 DNPEPQ9ULA0 475 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 HEBP2Q9Y5Z4 205 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 ALG6Q9Y672 507 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 ARL5AQ9Y689 179 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 MPDZO75970 2070 aa2.75□□□□□ -1.97
CHMP4A-208ENST00000534106 VWFP04275 2813 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ROS1P08922 2347 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ABCA1O95477 2261 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ANKRD12Q6UB98 2062 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 IGLV3-12A0A075B6K2 115 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ATP6AP2A0A1C7CYW4 349 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 A0A1W2PQ72 361 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 GOLGA6L4A6NEF3 574 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ARHGEF33A8MVX0 844 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 IFRD1O00458 451 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 NDC80O14777 642 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ATP6AP2O75787 350 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 CDC123O75794 336 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SUN1O94901 812 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 NDST3O95803 873 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 AGTP01019 485 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 C8orf89P0DMQ9 161 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PF4V1P10720 104 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ICAM2P13598 275 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HOXB6P17509 224 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ACADLP28330 430 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HMGCLP35914 325 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 GJC1P36383 396 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC26A3P40879 764 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SSR1P43307 286 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 GSCP56915 257 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 MLF1P58340 268 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 XIAPP98170 497 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ACTN3Q08043 901 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 DMTNQ08495 405 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SP140Q13342 867 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 GRB7Q14451 532 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 KRT81Q14533 505 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 DPYSL2Q16555 572 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PRTGQ2VWP7 1150 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF750Q32MQ0 723 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC25A35Q3KQZ1 300 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 BCL7AQ4VC05 210 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 BOLA3Q53S33 107 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SFT2D3Q587I9 215 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SIRPB2Q5JXA9 342 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 MFSD4BQ5TF39 518 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ARHGAP11AQ6P4F7 1023 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 LRRC8BQ6P9F7 803 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PRSS57Q6UWY2 283 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 KIAA0408Q6ZU52 694 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 IL17RELQ6ZVW7 336 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PRSS41Q7RTY9 318 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF572Q7Z3I7 529 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 RPS19BP1Q86WX3 136 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF677Q86XU0 584 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PLD3Q8IV08 490 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 CMIPQ8IY22 773 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 EID3Q8N140 333 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 C17orf53Q8N3J3 647 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 PDPRQ8NCN5 879 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 OR9A4Q8NGU2 314 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 CFAP61Q8NHU2 1237 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HM13Q8TCT9 377 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 JADE3Q92613 823 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 RNASE6Q93091 150 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TSLPQ969D9 159 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TADA1Q96BN2 335 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 VPS50Q96JG6 964 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 LINC00615Q96LM1 132 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TEKT5Q96M29 485 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TSGA13Q96PP4 275 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SMC6Q96SB8 1091 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 APOL2Q9BQE5 337 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 REG4Q9BYZ8 158 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ASB8Q9H765 288 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 C10orf88Q9H8K7 445 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms