RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CHTF18Q8WVB6 975 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 SLX1AQ9BQ83 275 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 UTP23Q9BRU9 249 aaKnown RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 SORBS1Q9BX66 1292 aaKnown RBP9.17□□□□□ -0.94
NUP98-220ENST00000533346 SHCBP1LQ9BZQ2 653 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CDCP1Q9H5V8 836 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 PLA2G3Q9NZ20 509 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 VPS29Q9UBQ0 182 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 FBXW2Q9UKT8 454 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 CLCA3PQ9Y6N3 262 aa9.17□□□□□ -0.94
NUP98-220ENST00000533346 ESPL1Q14674 2120 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 C1orf226A1L170 272 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 GABRR3A8MPY1 467 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 A8MUI8 341 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 SAP18O00422 153 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 MANBAO00462 879 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 FCHO1O14526 889 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 UBFD1O14562 309 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 LDB3O75112 727 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 FGF4P08620 206 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 SLC35E2P0CK97 266 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 HLCSP50747 726 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 TDGF1P3P51864 188 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 FOLH1Q04609 750 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 MPEG1Q2M385 716 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 LIPMQ5VYY2 423 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 C18orf63Q68DL7 685 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 OR52E8Q6IFG1 317 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 FRMD7Q6ZUT3 714 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 CROCCP2Q86T23 111 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 ZNF227Q86WZ6 799 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 KIF2BQ8N4N8 673 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 BCORP1Q8N888 145 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 TMEM178AQ8NBL3 297 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 OR5L2Q8NGL0 311 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 OR6Y1Q8NGX8 325 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 NUBPLQ8TB37 319 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 METTL6Q8TCB7 284 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 NCLNQ969V3 563 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 TM4SF18Q96CE8 201 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 MTFMTQ96DP5 389 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 C19orf60Q96EN9 201 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 RBM18Q96H35 190 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 APOPT1Q96IL0 206 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 CNDP1Q96KN2 507 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 ART5Q96L15 291 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 TAAR6Q96RI8 345 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 DEFB126Q9BYW3 111 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 WDR41Q9HAD4 459 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 SSU72Q9NP77 194 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 PNO1Q9NRX1 252 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 FARSBQ9NSD9 589 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 MCM8Q9UJA3 840 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 WBP11Q9Y2W2 641 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 YARS2Q9Y2Z4 477 aaKnown RBP9.16□□□□□ -0.94
NUP98-220ENST00000533346 PCDHA9Q9Y5H5 950 aa9.16□□□□□ -0.94
NUP98-220ENST00000533346 RELNP78509 3460 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 UTP20O75691 2785 aaKnown RBP9.15□□□□□ -0.94
NUP98-220ENST00000533346 WIPF3A6NGB9 483 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 FOXO6A8MYZ6 492 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 C17orf105B2RV13 164 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 TYROBPO43914 113 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 MAN1A2O60476 641 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 TRIM13O60858 407 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 RASAL1O95294 804 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 AIFM1O95831 613 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 CRYABP02511 175 aaKnown RBP9.15□□□□□ -0.94
NUP98-220ENST00000533346 SP1P08047 785 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 NR2F6P10588 404 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 COX7A2P14406 83 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 CD46P15529 392 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 ALOX15P16050 662 aaPredicted RBP9.15□□□□□ -0.94
NUP98-220ENST00000533346 TSPAN8P19075 237 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 HMOX2P30519 316 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 SERPINB5P36952 375 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 ETV4P43268 484 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 CYB561P49447 251 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 NAGLUP54802 743 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 RNF4P78317 190 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 PLIN5Q00G26 463 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 FUT7Q11130 342 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 ASPHQ12797 758 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
NUP98-220ENST00000533346 PCLAFQ15004 111 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 OR1C1Q15619 314 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 CEBPEQ15744 281 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
NUP98-220ENST00000533346 SPIN4Q56A73 249 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 ZNF766Q5HY98 468 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 COLEC12Q5KU26 742 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 CCNYL2Q5T2Q4 361 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 SLC25A25Q6KCM7 469 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 SLC48A1Q6P1K1 146 aa9.15□□□□□ -0.94
NUP98-220ENST00000533346 HSDL2Q6YN16 418 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms