RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CCNYL2Q5T2Q4 361 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 EXOC3L1Q86VI1 746 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 OR4N5Q8IXE1 308 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 BEST3Q8N1M1 668 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 C1orf52Q8N6N3 182 aaKnown RBP19.08■□□□□ 0.64
CCS-208ENST00000533244 MORN4Q8NDC4 146 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 OR14A16Q8NHC5 309 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 DAZLQ92904 295 aaKnown RBP19.08■□□□□ 0.64
CCS-208ENST00000533244 C11orf24Q96F05 449 aaPredicted RBP19.08■□□□□ 0.64
CCS-208ENST00000533244 PGM2Q96G03 612 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 VMP1Q96GC9 406 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 CNDP1Q96KN2 507 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 MECRQ9BV79 373 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 WDR41Q9HAD4 459 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 TENM4Q6N022 2769 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 MYOCOSA0A1B0GUC4 107 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 OR5H15A6NDH6 313 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 CDK2AP1O14519 115 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 GPR75O95800 540 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 IFNA16P05015 189 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 CLCN2P51788 898 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 INPP5JQ15735 1006 aaPredicted RBP19.07■□□□□ 0.64
CCS-208ENST00000533244 PRR30Q53SZ7 412 aaPredicted RBP19.07■□□□□ 0.64
CCS-208ENST00000533244 OR52E8Q6IFG1 317 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 CPT1CQ8TCG5 803 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 UCN3Q969E3 161 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 NCLNQ969V3 563 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 SIRT5Q9NXA8 310 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 ACTL7BQ9Y614 415 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 CLCA3PQ9Y6N3 262 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 SHANK1Q9Y566 2161 aa19.07■□□□□ 0.64
CCS-208ENST00000533244 MYO18BQ8IUG5 2567 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 ARHGAP10A1A4S6 786 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 WASHC1A8K0Z3 465 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 PYCARD-AS1I3L0S3 204 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 NPHS1O60500 1241 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 DDAH2O95865 285 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 UROSP10746 265 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 MAPK12P53778 367 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 HMGCS1Q01581 520 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 NDUFAF5Q5TEU4 345 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 RPUSD3Q6P087 351 aaKnown RBP19.06■□□□□ 0.64
CCS-208ENST00000533244 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 TRIM46Q7Z4K8 759 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 RPS19BP1Q86WX3 136 aaKnown RBP19.06■□□□□ 0.64
CCS-208ENST00000533244 ST13P4Q8IZP2 240 aaPredicted RBP19.06■□□□□ 0.64
CCS-208ENST00000533244 OR6Y1Q8NGX8 325 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 MCM8Q9UJA3 840 aa19.06■□□□□ 0.64
CCS-208ENST00000533244 BAHCC1Q9P281 2608 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 TRAV17A0A0B4J275 112 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 TRBV11-1A0A0K0K1C0 115 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 GLOD5A6NK44 160 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 C17orf105B2RV13 164 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 PGRMC2O15173 223 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 WISP1O95388 367 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 BPGMP07738 259 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 ALOX15P16050 662 aaPredicted RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 MLF1P58340 268 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 TRA2BP62995 288 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 RAE1P78406 368 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 PLIN5Q00G26 463 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 SPIN4Q56A73 249 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 SCIMPQ6UWF3 145 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 RNF165Q6ZSG1 346 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 OR1N1Q8NGS0 311 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 TM4SF18Q96CE8 201 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 SNRNP40Q96DI7 357 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 APIPQ96GX9 242 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 DGAT2Q96PD7 388 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 BARD1Q99728 777 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 PELOQ9BRX2 385 aaKnown RBP19.05■□□□□ 0.64
CCS-208ENST00000533244 DEFB126Q9BYW3 111 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 SHCBP1LQ9BZQ2 653 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 CDCP1Q9H5V8 836 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 ABI3Q9P2A4 366 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 PCDHA9Q9Y5H5 950 aa19.05■□□□□ 0.64
CCS-208ENST00000533244 GUCY1B2O75343 617 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 F10P00742 488 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 SERPINB3P29508 390 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 GALNSP34059 522 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 TUBA3CQ13748 450 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 IGFBP7Q16270 282 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 TUBA3EQ6PEY2 450 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 DGAT2L6Q6ZPD8 337 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 SLC2A12Q8TD20 617 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 ZNF721Q8TF20 911 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 CES1P1Q9UKY3 287 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 NTNG1Q9Y2I2 539 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 CCL27Q9Y4X3 112 aa19.04■□□□□ 0.64
CCS-208ENST00000533244 C1orf226A1L170 272 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 TMEM200CA6NKL6 621 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 GABRR3A8MPY1 467 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 NPIPB8E9PQR5 432 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 AZIN1O14977 448 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 PRKNO60260 465 aaPredicted RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 IGKV3-11P04433 115 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 CHRNGP07510 517 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 SLC35E2P0CK97 266 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 COX7A2P14406 83 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms