RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NPPBP16860 134 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 ARL1P40616 181 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 FOXA1P55317 472 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 TRAF3Q13114 568 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 KIR2DS3Q14952 304 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLC9B1Q4ZJI4 515 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 KANK2Q63ZY3 851 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 LETMD1Q6P1Q0 360 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 PRMT9Q6P2P2 845 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 EPGNQ6UW88 154 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 PRSS58Q8IYP2 241 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 METTL27Q8N6F8 245 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 FAM98AQ8NCA5 519 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 METTL6Q8TCB7 284 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 SMPDL3AQ92484 453 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 RMND5BQ96G75 393 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 KCNA7Q96RP8 456 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 MIPEPQ99797 713 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 SIKE1Q9BRV8 207 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 ACTR8Q9H981 624 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 DYRK1BQ9Y463 629 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 TIMM22Q9Y584 194 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 MAU2Q9Y6X3 613 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 CPAMD8Q8IZJ3 1885 aa10.61□□□□□ -0.71
TRAPPC4-213ENST00000533149 TRPC5OSA6NMA1 111 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 FAM90A27PA6NNH2 459 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 IDSB3KWA1 339 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CLGNO14967 610 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PRAMEF4O60810 478 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CLDN9O95484 217 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 ENO1P06733 434 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 C8BP07358 591 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 UROSP10746 265 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 ITGAMP11215 1152 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CD46P15529 392 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 MAGP20916 626 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CCND1P24385 295 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PKLRP30613 574 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 EMP2P54851 167 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 TBPL1P62380 186 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 IRF8Q02556 426 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 BTKQ06187 659 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CHIT1Q13231 466 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PDCD2Q16342 344 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 THEMIS2Q5TEJ8 643 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PRAMEF9Q5VWM5 478 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 SCIMPQ6UWF3 145 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 SIAH3Q8IW03 269 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 ANKS4BQ8N8V4 417 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 LINC01555Q8NAE3 123 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 TMEM178AQ8NBL3 297 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 OR2L8Q8NGY9 312 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PPP1R36Q96LQ0 422 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 RILPQ96NA2 401 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 FRMD6Q96NE9 622 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 EBF4Q9BQW3 602 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 RAB11FIP5Q9BXF6 653 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 NUF2Q9BZD4 464 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 UCK2Q9BZX2 261 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 WDR55Q9H6Y2 383 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 CCDC177Q9NQR7 707 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 GPRC5BQ9NZH0 403 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 HEY2Q9UBP5 337 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 DNAJC15Q9Y5T4 150 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 KCNE2Q9Y6J6 123 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 HCFC1P51610 2035 aa10.6□□□□□ -0.71
TRAPPC4-213ENST00000533149 IGLV3-12A0A075B6K2 115 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 HYKKA2RU49 373 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 FITM1A5D6W6 292 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 SDHDO14521 159 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 SKAP2O75563 359 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 JUNP05412 331 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 CELA2AP08217 269 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 GNAZP19086 355 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 HMOX2P30519 316 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 CASP2P42575 452 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 PCDH1Q08174 1060 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 DOC2AQ14183 400 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 XKR6Q5GH73 641 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 LIPJQ5W064 366 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 NXPE4Q6UWF7 544 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 LCTLQ6UWM7 567 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLCO4C1Q6ZQN7 724 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 MYLK4Q86YV6 388 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 L3MBTL4Q8NA19 623 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 TWIST2Q8WVJ9 160 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 RND1Q92730 232 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 NEIL2Q969S2 332 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLC22A18Q96BI1 424 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 SCMH1Q96GD3 660 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF354BQ96LW1 612 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 PLCD4Q9BRC7 762 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 HAUS8Q9BT25 410 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms