RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 SLC28A2O43868 658 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 CRCPO75575 148 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 NR2F6P10588 404 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 ARRB2P32121 409 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 MAPK12P53778 367 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 ACER2Q5QJU3 275 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 NDUFAF5Q5TEU4 345 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 FCRLBQ6BAA4 426 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 CLEC6AQ6EIG7 209 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 PRICKLE2Q7Z3G6 844 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 NUDCD3Q8IVD9 361 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 CATSPER1Q8NEC5 780 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 ZNF354BQ96LW1 612 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 EPN3Q9H201 632 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 WDR41Q9HAD4 459 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 KCNK9Q9NPC2 374 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 MCM8Q9UJA3 840 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 CCL27Q9Y4X3 112 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 CLCA3PQ9Y6N3 262 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 BIRC5O15392 142 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 MAN1A2O60476 641 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 SORBS2O94875 1100 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 WDPCPO95876 746 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 SERPINB5P36952 375 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 STT3AP46977 705 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 TRA2BP62995 288 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 UGT3A2Q3SY77 523 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 SPIN4Q56A73 249 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 ABHD17BQ5VST6 288 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 KANK2Q63ZY3 851 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 GALNT18Q6P9A2 607 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 CRLF3Q8IUI8 442 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 MORN4Q8NDC4 146 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 SREK1Q8WXA9 508 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 DAZLQ92904 295 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 PPWD1Q96BP3 646 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 RBM18Q96H35 190 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 RNF32Q9H0A6 362 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 STMN4Q9H169 189 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 EML4Q9HC35 981 aaKnown RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 TEKT2Q9UIF3 430 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 ZNF223Q9UK11 482 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-209ENST00000532725 CES1P1Q9UKY3 287 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 TRAF6Q9Y4K3 522 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 PCDHA9Q9Y5H5 950 aa18.53■□□□□ 0.56
CPSF1-209ENST00000532725 C17orf105B2RV13 164 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 GUCY1B2O75343 617 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 ZWINTO95229 277 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 PLA2G2AP14555 144 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 TNNI3P19429 210 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 CLCN2P51788 898 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 BTKQ06187 659 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 ACSM2AQ08AH3 577 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 MEP1AQ16819 746 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 CES4AQ5XG92 561 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 ACSM2BQ68CK6 577 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 DGAT2L6Q6ZPD8 337 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 RNF165Q6ZSG1 346 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 RPS19BP1Q86WX3 136 aaKnown RBP18.52■□□□□ 0.56
CPSF1-209ENST00000532725 CLYBLQ8N0X4 340 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 ARMC10Q8N2F6 343 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 SLC5A8Q8N695 610 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 OR14A16Q8NHC5 309 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 NCLNQ969V3 563 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 TLCD1Q96CP7 247 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 PKNOX2Q96KN3 472 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 TUBB1Q9H4B7 451 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 CDCP1Q9H5V8 836 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 DNAJC15Q9Y5T4 150 aa18.52■□□□□ 0.56
CPSF1-209ENST00000532725 PRRC2CQ9Y520 2896 aaKnown RBP18.51■□□□□ 0.55
CPSF1-209ENST00000532725 WDR91A4D1P6 747 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 NPIPB8E9PQR5 432 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 DDAH2O95865 285 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 ALOX15P16050 662 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-209ENST00000532725 H2AFXP16104 143 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-209ENST00000532725 MLLT10P55197 1068 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 TAS2R50P59544 299 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 ARG2P78540 354 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 TLE1Q04724 770 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 KIAA0040Q15053 153 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 SPDYAQ5MJ70 313 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 OR52E8Q6IFG1 317 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 Q6ZSR9 355 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 HOMEZQ8IX15 550 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 ST13P4Q8IZP2 240 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-209ENST00000532725 MMP21Q8N119 569 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 LGI4Q8N135 537 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 VMP1Q96GC9 406 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 DGAT2Q96PD7 388 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 DEFB126Q9BYW3 111 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 SLAMF7Q9NQ25 335 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 LUZP4Q9P127 313 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 PTGDR2Q9Y5Y4 395 aa18.51■□□□□ 0.55
CPSF1-209ENST00000532725 NBASA2RRP1 2371 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 TRBV11-1A0A0K0K1C0 115 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 C1orf226A1L170 272 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 DYTNA2CJ06 578 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 TTLL8A6PVC2 850 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 SLC28A1O00337 649 aa18.5■□□□□ 0.55
CPSF1-209ENST00000532725 PCDH7O60245 1069 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms