RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CUEDC1Q9NWM3 386 aaPredicted RBP16.01■□□□□ 0.15
VPS26B-206ENST00000531741 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
VPS26B-206ENST00000531741 TMCC3Q9ULS5 477 aa16.01■□□□□ 0.15
VPS26B-206ENST00000531741 IFT52Q9Y366 437 aa16.01■□□□□ 0.15
VPS26B-206ENST00000531741 PRKAB1Q9Y478 270 aa16.01■□□□□ 0.15
VPS26B-206ENST00000531741 PLXND1Q9Y4D7 1925 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 A0A1W2PPV9 198 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 GPR89AB7ZAQ6 455 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 C5orf67F2Z3F1 127 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 RTCAO00442 366 aaKnown RBP16■□□□□ 0.15
VPS26B-206ENST00000531741 HMGN4O00479 90 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 FAAHO00519 579 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 UPK1BO75841 260 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 GPR89BP0CG08 455 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 CNR2P34972 360 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 KCNJ5P48544 419 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 MAPK11Q15759 364 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 TIMM50Q3ZCQ8 353 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 TMEM201Q5SNT2 666 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 PLAG1Q6DJT9 500 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 TNFAIP8L2Q6P589 184 aaPredicted RBP16■□□□□ 0.15
VPS26B-206ENST00000531741 PTCHD4Q6ZW05 846 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 MMAAQ8IVH4 418 aaKnown RBP16■□□□□ 0.15
VPS26B-206ENST00000531741 C2orf73Q8N5S3 287 aaPredicted RBP16■□□□□ 0.15
VPS26B-206ENST00000531741 ITFG2Q969R8 447 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 ZNF354BQ96LW1 612 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 DDX31Q9H8H2 851 aaKnown RBP16■□□□□ 0.15
VPS26B-206ENST00000531741 SLC25A19Q9HC21 320 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 ZSCAN32Q9NX65 697 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 REV1Q9UBZ9 1251 aa16■□□□□ 0.15
VPS26B-206ENST00000531741 TRBV4-1A0A0J9YWV2 114 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 OTOL1A6NHN0 477 aaPredicted RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 DSCR3O14972 297 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ZW10O43264 779 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 GRK5P34947 590 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SMIM11AP58511 58 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 RPS26P62854 115 aaKnown RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ZNF45Q02386 682 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 PRKCDQ05655 676 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 CDC20Q12834 499 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SFSWAPQ12872 951 aaKnown RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ZNF181Q2M3W8 571 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 RPS26P11Q5JNZ5 115 aaPredicted RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 TCTN3Q6NUS6 607 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 TEFMQ96QE5 360 aaKnown RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ZNF607Q96SK3 696 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 CDADC1Q9BWV3 514 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 UCK2Q9BZX2 261 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SP140LQ9H930 580 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 RHCGQ9UBD6 479 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SLC6A14Q9UN76 642 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 NDUFS4O43181 175 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 B4GALT2O60909 372 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SLITRK5O94991 958 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ELAVL4P26378 380 aaKnown RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 CYP4F2P78329 520 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 CBX3Q13185 183 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 PIP5KL1Q5T9C9 394 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 MEDAGQ5VYS4 303 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SLX4IPQ5VYV7 408 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SNX29P2Q8IUI4 249 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 SUSD6Q92537 303 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 Q96MT0 163 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 FUZQ9BT04 418 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 RSPO3Q9BXY4 272 aaPredicted RBP15.99■□□□□ 0.15
VPS26B-206ENST00000531741 RACGAP1Q9H0H5 632 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ABCG4Q9H172 646 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 ACSL5Q9ULC5 683 aa15.99■□□□□ 0.15
VPS26B-206ENST00000531741 KMOO15229 486 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 TMPRSS11DO60235 418 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 SEMA7AO75326 666 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 CLEC3AO75596 197 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 DRD2P14416 443 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 UGT2B15P54855 530 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.98■□□□□ 0.15
VPS26B-206ENST00000531741 AGERQ15109 404 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 FAM78AQ5JUQ0 283 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 DCST1Q5T197 706 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 FAM46CQ5VWP2 391 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 C12orf73Q69YU5 71 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 SMG7Q92540 1137 aaKnown RBP15.98■□□□□ 0.15
VPS26B-206ENST00000531741 ZFYVE19Q96K21 471 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 ASB16Q96NS5 453 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 OR51E2Q9H255 320 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 CPNE5Q9HCH3 593 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 EHD3Q9NZN3 535 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 CCDC88CQ9P219 2028 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 H7BY64 318 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 M0R129 80 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 TLR4O00206 839 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 ADAM23O75077 832 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 H1F0P07305 194 aaKnown RBP15.98■□□□□ 0.15
VPS26B-206ENST00000531741 TEAD1P28347 426 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 CCT3P49368 545 aaKnown RBP15.98■□□□□ 0.15
VPS26B-206ENST00000531741 RHAGQ02094 409 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 DMPKQ09013 629 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 HSPB3Q12988 150 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 SPDYE7PQ495Y7 208 aa15.98■□□□□ 0.15
VPS26B-206ENST00000531741 RNLSQ5VYX0 342 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms