RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 KRT12Q99456 494 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 TIMP4Q99727 224 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 DOHHQ9BU89 302 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 PLEKHF2Q9H8W4 249 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF629Q9UEG4 869 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 DAPP1Q9UN19 280 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 EIF3LQ9Y262 564 aaKnown RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SLC6A5Q9Y345 797 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 CLDN16Q9Y5I7 305 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SPACA6W5XKT8 324 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 RTCAO00442 366 aaKnown RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 BANF1O75531 89 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ENO2P09104 434 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CCDC175P0C221 793 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 PGAM1P18669 254 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CD53P19397 219 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CPN2P22792 545 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CTSSP25774 331 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 SERPINB3P29508 390 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CEACAM8P31997 349 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 HPDP32754 393 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 MAGEA6P43360 314 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 MASP1P48740 699 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF136P52737 540 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF267Q14586 743 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CRYMQ14894 314 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 SF3B4Q15427 424 aaKnown RBP eCLIP8.49□□□□□ -1.053e-15■■■■□ 24.1
NEDD8-206ENST00000531430 MPEG1Q2M385 716 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ACSF3Q4G176 576 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 FBXO48Q5FWF7 155 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 Q5PR19 223 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ARMC3Q5W041 872 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ADNP2Q6IQ32 1131 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 TTC27Q6P3X3 843 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ABHD17CQ6PCB6 329 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 TMEM64Q6YI46 380 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 SLCO4C1Q6ZQN7 724 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 LACC1Q8IV20 430 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 SNX31Q8N9S9 440 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 OR10G3Q8NGC4 313 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF721Q8TF20 911 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ESAMQ96AP7 390 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ARSGQ96EG1 525 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CFAP36Q96G28 342 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 Q96MF0 132 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 QRFPRQ96P65 431 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 MAPKAP1Q9BPZ7 522 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 RBM24Q9BX46 236 aaKnown RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ACKR4Q9NPB9 350 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 BEX4Q9NWD9 120 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CNIH4Q9P003 139 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 CTNNAL1Q9UBT7 734 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 ARHGAP21Q5T5U3 1957 aa8.49□□□□□ -1.05
NEDD8-206ENST00000531430 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 HRKO00198 91 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SAP18O00422 153 aaKnown RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 ERN1O75460 977 aaKnown RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 CLEC3AO75596 197 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 TMIGD3P0DMS9 266 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 PCNAP12004 261 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 OPRM1P35372 400 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 TIMP3P35625 211 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SRYQ05066 204 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SLAMF1Q13291 335 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 AP5B1Q2VPB7 878 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SPANXN3Q5MJ09 141 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 TEDDM1Q5T9Z0 273 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 HIST2H2AA3Q6FI13 130 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 FAM45BPQ6NSW5 357 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 CCDC137Q6PK04 289 aaKnown RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SBSNQ6UWP8 590 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SLC29A4Q7RTT9 530 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 TMEM139Q8IV31 216 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 PM20D2Q8IYS1 436 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 NKAPQ8N5F7 415 aaKnown RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 OR8K3Q8NH51 312 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 FAM45AQ8TCE6 357 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 PAQR8Q8TEZ7 354 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 ANKRD9Q96BM1 317 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 SPACA9Q96E40 222 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 MS4A14Q96JA4 679 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 GNRHR2Q96P88 292 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 CAPS2Q9BXY5 557 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF703Q9H7S9 590 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 PRDM7Q9NQW5 492 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 ZNF490Q9ULM2 529 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-206ENST00000531430 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 KIAA1549Q9HCM3 1950 aa8.48□□□□□ -1.05
NEDD8-206ENST00000531430 ARID1AO14497 2285 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SH3D21A4FU49 640 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 SYNDIG1LA6NDD5 238 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 LRRC3CA6NJW4 275 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 TP53I11O14683 189 aa8.47□□□□□ -1.05
NEDD8-206ENST00000531430 GNB5O14775 395 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms