RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RAPH1Q70E73 1250 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 CHSY3Q70JA7 882 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 CTAGE3PQ8IX95 158 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 C9orf40Q8IXQ3 194 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 LIX1Q8N485 282 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 ZNF721Q8TF20 911 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 WDR34Q96EX3 536 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 CPNE1Q99829 537 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 ALG9Q9H6U8 611 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 PRDM7Q9NQW5 492 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 DNAJB12Q9NXW2 375 aaKnown RBP14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 NUDT4Q9NZJ9 180 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 OPTCQ9UBM4 332 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 B4GALT7Q9UBV7 327 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 Q9UFV3 132 aa14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.61□□□□□ -0.07
CHMP4A-204ENST00000530996 SUSD5O60279 629 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 OR10H2O60403 315 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 HCN1O60741 890 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ZNF354AO60765 605 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 LRATO95237 230 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SERPINB1P30740 379 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SSTR1P30872 391 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 DNAJA1P31689 397 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 GP5P40197 560 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 PAFAH1B1P43034 410 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 STT3AP46977 705 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 RAB10P61026 200 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 FOXO1Q12778 655 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 KHDRBS2Q5VWX1 349 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SLC29A4Q7RTT9 530 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 UBE3DQ7Z6J8 389 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ZZZ3Q8IYH5 903 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 DOK4Q8TEW6 326 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ZNF473Q8WTR7 871 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ANKRD9Q96BM1 317 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 PPWD1Q96BP3 646 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SPACA9Q96E40 222 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 CMTM7Q96FZ5 175 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 RBM18Q96H35 190 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 GPR22Q99680 433 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 RBBP8Q99708 897 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SORBS1Q9BX66 1292 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 POLDIP3Q9BY77 421 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 CD244Q9BZW8 370 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SLC6A15Q9H2J7 730 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 DPH5Q9H2P9 285 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 OR51B5Q9H339 312 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 RPF2Q9H7B2 306 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ZNF703Q9H7S9 590 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 SEMA4BQ9NPR2 832 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 PTBP2Q9UKA9 531 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 ANGPTL3Q9Y5C1 460 aa14.6□□□□□ -0.07
CHMP4A-204ENST00000530996 A0A1B0GVC2 190 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 CXorf49A8MYA2 514 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 CCDC188H7C350 402 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 GABRA1P14867 456 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 TLX1P31314 330 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 UQCRC1P31930 480 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 ADH7P40394 386 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 BUD31P41223 144 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 TRPC1P48995 793 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 GNG11P61952 73 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 PHEXP78562 749 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 MRPS25P82663 173 aaKnown RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 FOLH1Q04609 750 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 SLAMF1Q13291 335 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 SNTB1Q13884 538 aaKnown RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 TBCCQ15814 346 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 MPEG1Q2M385 716 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 SLC22A10Q63ZE4 541 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 RTL6Q6ICC9 239 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 TBC1D1Q86TI0 1168 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 BBOF1Q8ND07 529 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 C7orf57Q8NEG2 295 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 NUBPLQ8TB37 319 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 SENP5Q96HI0 755 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 NAPGQ99747 312 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 MCMBPQ9BTE3 642 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 SPRR3Q9UBC9 169 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 PHF11Q9UIL8 331 aa14.59□□□□□ -0.07
CHMP4A-204ENST00000530996 C15orf38-AP3S2A0A0A6YYH1 394 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 IQANK1A0A1B0GTG1 560 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 UBXN8O00124 270 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 PRKRAO75569 313 aaKnown RBP14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 SCELO95171 688 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 WISP3O95389 354 aaPredicted RBP14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 ALOX15P16050 662 aaPredicted RBP14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 EPORP19235 508 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 ENDOUP21128 410 aaKnown RBP14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 GDF1P27539 372 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 GMPRP36959 345 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 HERVK_113P63132 956 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 ERVK-8P63133 956 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 TBL3Q12788 808 aaKnown RBP14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 GTF3C1Q12789 2109 aa14.58□□□□□ -0.08
CHMP4A-204ENST00000530996 FBXW10Q5XX13 1052 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms