RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 SENP5Q96HI0 755 aaPredicted RBP7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 KCNC2Q96PR1 638 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 TBCDQ9BTW9 1192 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 EFCAB11Q9BUY7 163 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 CNPPD1Q9BV87 410 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 ZNF717Q9BY31 904 aaPredicted RBP7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 TP63Q9H3D4 680 aaPredicted RBP7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 CNOT10Q9H9A5 744 aaKnown RBP7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 MCCC2Q9HCC0 563 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 LYRM4Q9HD34 91 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 SH2D2AQ9NP31 389 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 COQ3Q9NZJ6 369 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 MRPS33Q9Y291 106 aaKnown RBP7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 FAM215AQ9Y5M1 114 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 MED12LQ86YW9 2145 aa7.57□□□□□ -1.2
GPATCH4-214ENST00000529520 A0A088AWK7 358 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 A0A0G2JNJ9 132 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 A0A1B0GVC2 190 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ATP6AP2A0A1C7CYW4 349 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GLOD5A6NK44 160 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SUPT3HB4E1H0 165 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 K7EPI3 171 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 EIF3HO15372 352 aaKnown RBP eCLIP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SUPT3HO75486 399 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 EEDO75530 441 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ATP6AP2O75787 350 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SCELO95171 688 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 LRATO95237 230 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 IGHG3P01860 377 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 CLPSP04118 112 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 IGKV3-11P04433 115 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GLI4P10075 376 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ZNF10P21506 573 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SPRP35270 261 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ADH7P40394 386 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SSR2P43308 183 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 MAGEA4P43358 317 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 PIK3CGP48736 1102 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 NEK2P51955 445 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 RPS13P62277 151 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GUCY2DQ02846 1103 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 FOLH1Q04609 750 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 PCDH1Q08174 1060 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 CALCOCO2Q13137 446 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 DDX39BQ13838 428 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SERTAD2Q14140 314 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SLMAPQ14BN4 828 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 HIST2H2ACQ16777 129 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 AP5B1Q2VPB7 878 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ZNF791Q3KP31 576 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 PAGE2BQ5JRK9 111 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 KHDRBS2Q5VWX1 349 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 HIST2H2AA3Q6FI13 130 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 TMEM211Q6ICI0 200 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GRHL2Q6ISB3 625 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 RTL4Q6ZR62 310 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 RAPH1Q70E73 1250 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 TRILQ7L0X0 811 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 LRRC70Q7Z2Q7 622 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 CCDC25Q86WR0 208 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GPALPP1Q8IXQ4 340 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 PLD6Q8N2A8 252 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 TEX9Q8N6V9 391 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 BBOF1Q8ND07 529 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 OR8K3Q8NH51 312 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 STAG3L4Q8TBR4 150 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 RND1Q92730 232 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 GPR78Q96P69 363 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 MTERF1Q99551 399 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 FAM173AQ9BQD7 235 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 TTYH2Q9BSA4 534 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 IL1RL2Q9HB29 575 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ZNF358Q9NW07 568 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 NUDT4Q9NZJ9 180 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 TXNDC16Q9P2K2 825 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 SPRR3Q9UBC9 169 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 RNF14Q9UBS8 474 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 Q9UFV3 132 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 ASB4Q9Y574 426 aa7.56□□□□□ -1.2
GPATCH4-214ENST00000529520 A0A1W2PR48 441 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 PROM1O43490 865 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 TMPRSS11DO60235 418 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 KERAO60938 352 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 GBAP04062 536 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 S100BP04271 92 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 C2P06681 752 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 LTA4HP09960 611 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 MSX1P28360 303 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 CHRNB4P30926 498 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 BSGP35613 385 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 STT3AP46977 705 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 DLX5P56178 289 aa7.55□□□□□ -1.2
GPATCH4-214ENST00000529520 HERVK_113P63132 956 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms