RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HNRNPFP52597 415 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ABCE1P61221 599 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 HMGCS1Q01581 520 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ID2Q02363 134 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 OC90Q02509 493 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF763Q0D2J5 394 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 Q0VFX4 171 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TBL3Q12788 808 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 STX3Q13277 289 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TLR1Q15399 786 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATP6AP1LQ52LC2 224 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ACER2Q5QJU3 275 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 AGBL2Q5U5Z8 902 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 KANK2Q63ZY3 851 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATG16L1Q676U5 607 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 B3GNTL1Q67FW5 361 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 C18orf63Q68DL7 685 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC6A19Q695T7 634 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MRM1Q6IN84 353 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SCIMPQ6UWF3 145 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 IGFL3Q6UXB1 125 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 HSDL2Q6YN16 418 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 RNF165Q6ZSG1 346 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 IKBIPQ70UQ0 350 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC29A4Q7RTT9 530 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRIM46Q7Z4K8 759 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ST13P4Q8IZP2 240 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CLYBLQ8N0X4 340 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MORN4Q8NDC4 146 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM52Q8NDY8 209 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR5L2Q8NGL0 311 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 DNAJB14Q8TBM8 379 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 RAB3IL1Q8TBN0 382 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MGARPQ8TDB4 240 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CHTF18Q8WVB6 975 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TWIST2Q8WVJ9 160 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 DYDC1Q8WWB3 177 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 RIT1Q92963 219 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 NCLNQ969V3 563 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 PNPLA2Q96AD5 504 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM125Q96AQ2 219 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZBTB9Q96C00 473 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 KLHL29Q96CT2 875 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATP6V1G3Q96LB4 118 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 PPP3R2Q96LZ3 170 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 C5orf34Q96MH7 638 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MESP1Q9BRJ9 268 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 UTP23Q9BRU9 249 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CNPPD1Q9BV87 410 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 EBPLQ9BY08 206 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF717Q9BY31 904 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MFRPQ9BY79 579 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SEMA4CQ9C0C4 833 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR8D2Q9GZM6 311 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 RNF32Q9H0A6 362 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 VIPAS39Q9H9C1 493 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 LRTM1Q9HBL6 345 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMBIM4Q9HC24 238 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MLXIPLQ9NP71 852 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 C1orf109Q9NX04 203 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TEX10Q9NXF1 929 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 STMN3Q9NZ72 180 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 VTI1BQ9UEU0 232 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF225Q9UK10 706 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 WBP11Q9Y2W2 641 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMED5Q9Y3A6 229 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRAF6Q9Y4K3 522 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ASB4Q9Y574 426 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 KMT2BQ9UMN6 2715 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR5H15A6NDH6 313 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR6C76A6NM76 312 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GABRR3A8MPY1 467 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 K7EM74 188 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PIP5K1BO14986 540 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 VPS4BO75351 444 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SKAP2O75563 359 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRKRAO75569 313 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ERAL1O75616 437 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZFAND5O76080 213 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PDGFAP04085 211 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CELA2AP08217 269 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FGF4P08620 206 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 IL3P08700 152 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 LINC00032P0C843 101 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC35E2P0CK97 266 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CPMP14384 443 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CD46P15529 392 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CHN1P15882 459 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 H2AFXP16104 143 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 BGNP21810 368 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERPINB3P29508 390 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 NTSP30990 170 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GALNSP34059 522 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SOX11P35716 441 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 HPCAL1P37235 193 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPL3P39023 403 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ASMTP46597 345 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC1A6P48664 564 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SSR4P51571 173 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms