RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SDHDO14521 159 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 OR10H2O60403 315 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CTNSO60931 367 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 GPR75O95800 540 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ALDOCP09972 364 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PRR35P0CG20 571 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 G6PDP11413 515 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 BCKDHAP12694 445 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 HSD3B1P14060 373 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CD1EP15812 388 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NT5EP21589 574 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 HSD3B2P26439 372 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PIK3R1P27986 724 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TLX1P31314 330 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SSTR4P31391 388 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SERPINB5P36952 375 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 BUD31P41223 144 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CD97P48960 835 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 XKP51811 444 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC18A1P54219 525 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 AQP5P55064 265 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 HSD17B7P56937 341 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC26A5P58743 744 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ERVK-8P63133 956 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SKP1P63208 163 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 MRPS35P82673 323 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PLIN5Q00G26 463 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF763Q0D2J5 394 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF267Q14586 743 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PTGR1Q14914 329 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 EXOSC7Q15024 291 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NNATQ16517 81 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 MPEG1Q2M385 716 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TRMT12Q53H54 448 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SPIN4Q56A73 249 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC48A1Q6P1K1 146 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM64Q6YI46 380 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 QSOX2Q6ZRP7 698 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NDUFAF7Q7L592 441 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PAGE2Q7Z2X7 111 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR53Q7Z5U6 358 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CRLF3Q8IUI8 442 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TRIM42Q8IWZ5 723 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF595Q8IYB9 648 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CCDC116Q8IYX3 515 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CLEC4FQ8N1N0 589 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM132CQ8N3T6 1108 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CLEC1AQ8NC01 280 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PLPP5Q8NEB5 264 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CATSPER1Q8NEC5 780 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NFAM1Q8NET5 270 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 OR7A2PQ8NGA2 310 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 OR4K14Q8NGD5 310 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PTPMT1Q8WUK0 201 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TTC9Q92623 222 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 KAT2AQ92830 837 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NCLNQ969V3 563 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 KLHL29Q96CT2 875 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 C11orf24Q96F05 449 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CNRIP1Q96F85 164 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 OTUB1Q96FW1 271 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 IMMP1LQ96LU5 166 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CATSPER2Q96P56 530 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 DGAT2Q96PD7 388 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 LPAR4Q99677 370 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 EBF4Q9BQW3 602 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CNPPD1Q9BV87 410 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 BRINP2Q9C0B6 783 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 OR8D2Q9GZM6 311 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR41Q9HAD4 459 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 KCNK13Q9HB14 408 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NPHS2Q9NP85 383 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ATP13A2Q9NQ11 1180 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 MIEF1Q9NQG6 463 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 FGFR1OP2Q9NVK5 253 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 THAP1Q9NVV9 213 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 NMRK1Q9NWW6 199 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PSD3Q9NYI0 1048 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 GPR83Q9NYM4 423 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 DCTN4Q9UJW0 460 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF223Q9UK11 482 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 UTS2RQ9UKP6 389 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CES1P1Q9UKY3 287 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PPT2Q9UMR5 302 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 MRPS33Q9Y291 106 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TP53TG5Q9Y2B4 290 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PCDHA9Q9Y5H5 950 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 USH1CQ9Y6N9 552 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SPACA6W5XKT8 324 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 DMXL2Q8TDJ6 3036 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CELSR3Q9NYQ7 3312 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CFAP47Q6ZTR5 3102 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms