RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 BPIFA1Q9NP55 256 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MBNL1Q9NR56 388 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ZDHHC18Q9NUE0 388 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 IL1RAPL1Q9NZN1 696 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PAK5Q9P286 719 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 BCCIPQ9P287 314 aaKnown RBP eCLIP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RNF14Q9UBS8 474 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MALT1Q9UDY8 824 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SLC2A6Q9UGQ3 507 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FAM153AQ9UHL3 310 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SNX24Q9Y343 169 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF711Q9Y462 761 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PCYT1BQ9Y5K3 369 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ARL5AQ9Y689 179 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 V9GYY5 206 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SPTA1P02549 2419 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 EP300Q09472 2414 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 UNC13CQ8NB66 2214 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC88CQ9P219 2028 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FER1L5A0AVI2 2057 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 COL5A1P20908 1838 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SETD2Q9BYW2 2564 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GOLGA6L10A0A0M3HER8 536 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 C1orf232A0A0U1RR37 186 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ZCWPW2A0A1B0GU75 182 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 A0A1W2PR77 199 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CTAGE15A4D2H0 777 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 IGLON5A6NGN9 336 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 OR51F1A6NGY5 319 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 FAM157AC9JC47 383 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PRAC2D3DTV9 90 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 NPIPB11E5RHQ5 1161 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 E7ESA3 106 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CLGNO14967 610 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 LATO43561 262 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PIAS1O75925 651 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ANXA9O76027 345 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 NEBLO76041 1014 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE7O76087 117 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 RECQL5O94762 991 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SEMA4FO95754 770 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PAK4O96013 591 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SLC4A1P02730 911 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 FGF1P05230 155 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 APRTP07741 180 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CTAGE8P0CG41 777 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE12FP0CL80 117 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE12GP0CL81 117 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE12IP0CL82 117 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 IGHV4-30-4P0DP06 118 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ACADMP11310 421 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 HLA-DPA1P20036 260 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PSMA3P25788 255 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 NMBRP28336 390 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 FDFT1P37268 417 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 MTNR1AP48039 350 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GLIPR1P48060 266 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF140P52738 457 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 STC1P52823 247 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CLDN2P57739 230 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 XIAPP98170 497 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GUCY2DQ02846 1103 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CREB5Q02930 508 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ACVR1Q04771 509 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CKAP4Q07065 602 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE1Q13065 139 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GAGE4Q13068 117 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PEX6Q13608 980 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 DHX34Q14147 1143 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 POU6F1Q14863 301 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 IRF4Q15306 451 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PPP1R7Q15435 360 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TTC31Q49AM3 519 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SETMARQ53H47 684 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 HENMT1Q5T8I9 393 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ARMC12Q5T9G4 340 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 FAM46CQ5VWP2 391 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ITPRIPL1Q6GPH6 555 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TCEAL6Q6IPX3 200 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ADAM5Q6NVV9 412 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 C8orf74Q6P047 294 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC8BQ6P9F7 803 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 BRAT1Q6PJG6 821 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 UNQ6126/PRO20091Q6UXV3 157 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GLT6D1Q7Z4J2 308 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 DSG4Q86SJ6 1040 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CTAGE6Q86UF2 777 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TRIM69Q86WT6 500 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 HORMAD1Q86X24 394 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CTAGE4Q8IX94 777 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 BBS5Q8N3I7 341 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CEP112Q8N8E3 955 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC89Q8N998 374 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SUMF1Q8NBK3 374 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 POC1AQ8NBT0 407 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 OR4K2Q8NGD2 314 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 OR13J1Q8NGT2 312 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 OR2T34Q8NGX1 318 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC26Q8TAB7 109 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms