RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ZNF227Q86WZ6 799 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 TCP10LQ8TDR4 215 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 CCDC126Q96EE4 140 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 APIPQ96GX9 242 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ZNF354BQ96LW1 612 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ZIM3Q96PE6 472 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 TAAR6Q96RI8 345 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 OR8D2Q9GZM6 311 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLK4-211ENST00000522556 BRF2Q9HAW0 419 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 PPIEQ9UNP9 301 aaKnown RBP16.64■□□□□ 0.25
CLK4-211ENST00000522556 SPACA6W5XKT8 324 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 UBR5O95071 2799 aaPredicted RBP16.64■□□□□ 0.25
CLK4-211ENST00000522556 C17orf105B2RV13 164 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 TCP11X1B4DZS4 312 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 KRT6AP02538 564 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 KRT6BP04259 564 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 ENO1P06733 434 aaKnown RBP16.63■□□□□ 0.25
CLK4-211ENST00000522556 CD96P40200 585 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 KRT6CP48668 564 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 PKNOX1P55347 436 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 MLF1P58340 268 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 TAS2R50P59544 299 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 AP2B1P63010 937 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 RAE1P78406 368 aaKnown RBP16.63■□□□□ 0.25
CLK4-211ENST00000522556 SRSF1Q07955 248 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLK4-211ENST00000522556 TERF2Q15554 542 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 MEP1AQ16819 746 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 CCNYL2Q5T2Q4 361 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 LIPMQ5VYY2 423 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 CLEC6AQ6EIG7 209 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 ZCCHC23Q6ZST2 131 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 SLC5A8Q8N695 610 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 MDS2Q8NDY4 140 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 SLC2A12Q8TD20 617 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 GRHL3Q8TE85 626 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 VMP1Q96GC9 406 aa16.63■□□□□ 0.25
CLK4-211ENST00000522556 TYROBPO43914 113 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 WISP2O76076 250 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CHRNGP07510 517 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 ARRB2P32121 409 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 BUD31P41223 144 aaPredicted RBP16.62■□□□□ 0.25
CLK4-211ENST00000522556 STT3AP46977 705 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CLCN2P51788 898 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 MAPK12P53778 367 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 DUSP2Q05923 314 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 SERTAD2Q14140 314 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 C10orf62Q5T681 223 aaPredicted RBP16.62■□□□□ 0.25
CLK4-211ENST00000522556 NDUFAF5Q5TEU4 345 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 SPINK14Q6IE38 97 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 FAM180BQ6P0A1 224 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CNPY4Q8N129 248 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 ZNF721Q8TF20 911 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CHTF18Q8WVB6 975 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 EBPLQ9BY08 206 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 DEFB126Q9BYW3 111 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 CLMPQ9H6B4 373 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 KLHL1Q9NR64 748 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 MS4A12Q9NXJ0 267 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 TEKT2Q9UIF3 430 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
CLK4-211ENST00000522556 CLCA3PQ9Y6N3 262 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 MYO18BQ8IUG5 2567 aa16.62■□□□□ 0.25
CLK4-211ENST00000522556 TRAV17A0A0B4J275 112 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 TMEM233B4DJY2 109 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 ZNF354AO60765 605 aaPredicted RBP16.61■□□□□ 0.25
CLK4-211ENST00000522556 ULK1O75385 1050 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 NEURL1O76050 574 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 ALOX15P16050 662 aaPredicted RBP16.61■□□□□ 0.25
CLK4-211ENST00000522556 TNNI3P19429 210 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 KCNC4Q03721 635 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 BTKQ06187 659 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 CSTF3Q12996 717 aaKnown RBP16.61■□□□□ 0.25
CLK4-211ENST00000522556 NR6A1Q15406 480 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 OR1C1Q15619 314 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 CFAP157Q5JU67 520 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 CEP85LQ5SZL2 805 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 TMEM132CQ8N3T6 1108 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 OR14A16Q8NHC5 309 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 TANKQ92844 425 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 TM4SF18Q96CE8 201 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 DGAT2Q96PD7 388 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 BARD1Q99728 777 aaKnown RBP16.61■□□□□ 0.25
CLK4-211ENST00000522556 IQCGQ9H095 443 aaKnown RBP16.61■□□□□ 0.25
CLK4-211ENST00000522556 HEY2Q9UBP5 337 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 VPS29Q9UBQ0 182 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 ADAM29Q9UKF5 820 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 FIS1Q9Y3D6 152 aa16.61■□□□□ 0.25
CLK4-211ENST00000522556 BLACEA4D250 179 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 PRAMEF2O60811 474 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 TRIM13O60858 407 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 GPR75O95800 540 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 CLPSP04118 112 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 CT62P0C5K7 136 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 HSD3B1P14060 373 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 HSD3B2P26439 372 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 TLX1P31314 330 aaPredicted RBP16.6■□□□□ 0.25
CLK4-211ENST00000522556 ETV4P43268 484 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms