RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 GOLGA8QA0A0J9YX86 632 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 GOLGA8OA6NCC3 632 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 GOLGA8NF8WBI6 632 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ANKRD28O15084 1053 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PRMT3O60678 531 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NME6O75414 186 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 CT62P0C5K7 136 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PIM1P11309 404 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 BCKDHAP12694 445 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 MAPK12P53778 367 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 DUSP8Q13202 625 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 RAPSNQ13702 412 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NSDHLQ15738 373 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SPIN4Q56A73 249 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SPDYAQ5MJ70 313 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 EXD3Q8N9H8 876 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 APCDD1LQ8NCL9 501 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SRFBP1Q8NEF9 429 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 ZNF681Q96N22 645 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ZNF700Q9H0M5 742 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ZNF160Q9HCG1 818 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PRDM9Q9NQV7 894 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 C1orf109Q9NX04 203 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 PADI2Q9Y2J8 665 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PCDHA9Q9Y5H5 950 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SPTA1P02549 2419 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ERICH4A6NGS2 130 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 TMEM200CA6NKL6 621 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 A8MUA0 341 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 TCP11X1B4DZS4 312 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SEC22BO75396 215 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 NR2F6P10588 404 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ALOX15P16050 662 aaPredicted RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 ZFP36L2P47974 494 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 CD97P48960 835 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ACSM2AQ08AH3 577 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 IMPG1Q17R60 797 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SFT2D3Q587I9 215 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ACSM2BQ68CK6 577 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SLC48A1Q6P1K1 146 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CYP20A1Q6UW02 462 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CPEB2Q7Z5Q1 589 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 ZNF595Q8IYB9 648 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 KRTCAP2Q8N6L1 136 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 RFWD2Q8NHY2 731 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 MARK4Q96L34 752 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 FAM117AQ9C073 453 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 ANKRA2Q9H9E1 313 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 CLK4Q9HAZ1 481 aaKnown RBP6.28□□□□□ -1.4
CDH12-208ENST00000522262 PRTFDC1Q9NRG1 225 aa6.28□□□□□ -1.4
CDH12-208ENST00000522262 SLC28A1O00337 649 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 RGS14O43566 566 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ZNF354AO60765 605 aaPredicted RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 EDF1O60869 148 aaKnown RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 CTNSO60931 367 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 LRATO95237 230 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 DDAH2O95865 285 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 C1QCP02747 245 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ANXA4P09525 319 aaPredicted RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 FAM87AP0C7U9 286 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ITGAMP11215 1152 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 G6PDP11413 515 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 NEFHP12036 1026 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 HSD17B7P56937 341 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ZNF763Q0D2J5 394 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 MGAT2Q10469 447 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 SF3A3Q12874 501 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDH12-208ENST00000522262 SLC13A2Q13183 592 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 LTB4RQ15722 352 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ATG16L1Q676U5 607 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 NIPAL1Q6NVV3 410 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 RIMKLAQ8IXN7 391 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 FDCSPQ8NFU4 85 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 LRRC8CQ8TDW0 803 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 SREK1Q8WXA9 508 aaKnown RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 PMM1Q92871 262 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 TUBGCP3Q96CW5 907 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 TSSK3Q96PN8 268 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ZNF317Q96PQ6 595 aaPredicted RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 EFHD1Q9BUP0 239 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 NUDT9Q9BW91 350 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ALOXE3Q9BYJ1 711 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ROGDIQ9GZN7 287 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 ING2Q9H160 280 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 PRM3Q9NNZ6 103 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 LYARQ9NX58 379 aaKnown RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 VTI1BQ9UEU0 232 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 MAN2B2Q9Y2E5 1009 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 CSAG2Q9Y5P2 127 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 USH1CQ9Y6N9 552 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 A0A088AWK7 358 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 GNG14A0A1W2PPG7 69 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 C9JVG2 144 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 PSMD12O00232 456 aaPredicted RBP6.27□□□□□ -1.41
CDH12-208ENST00000522262 HDAC3O15379 428 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 CEACAM4O75871 244 aa6.27□□□□□ -1.41
CDH12-208ENST00000522262 MYO1DO94832 1006 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms