RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PARP8Q8N3A8 854 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 CERS5Q8N5B7 392 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 GVQW1Q8N7I0 195 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR9Q2Q8NGE9 314 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR6F1Q8NGZ6 308 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 FAM76AQ8TAV0 307 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 TCP11Q8WWU5 503 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 NCLNQ969V3 563 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 TMEM45BQ96B21 275 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF501Q96CX3 271 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 PCED1BQ96HM7 432 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 DOCK7Q96N67 2140 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF300Q96RE9 604 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 JPH2Q9BR39 696 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 FAM124BQ9H5Z6 455 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ROPN1Q9HAT0 212 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 GDF3Q9NR23 364 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 SLC35D1Q9NTN3 355 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ATAD3AQ9NVI7 634 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 KLK11Q9UBX7 282 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 SMCHD1A6NHR9 2005 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 RAD54L2Q9Y4B4 1467 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 PTPRUQ92729 1446 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 MEIOCA2RUB1 952 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 HHLA1C9JL84 531 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 NPIPB9F8W1W9 429 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 B4GAT1O43505 415 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 TNFSF12O43508 249 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 TLX2O43763 284 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 PEX11AO75192 247 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 DIRAS3O95661 229 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 RPLP0P05388 317 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZFP36L2P47974 494 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ABCE1P61221 599 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 SNRPD1P62314 119 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZSWIM7Q19AV6 140 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 HLA-BQ31612 363 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF528Q3MIS6 628 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 AGKQ53H12 422 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 RIPPLY2Q5TAB7 128 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 DDI2Q5TDH0 399 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 LIPJQ5W064 366 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 Q6ZRG5 221 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 Q71RC1 249 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 CATSPERDQ86XM0 798 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 WDR49Q8IV35 697 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 HSCBQ8IWL3 235 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 BCORP1Q8N888 145 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ADAD2Q8NCV1 583 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR52B4Q8NGK2 314 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 RDH11Q8TC12 318 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 CHPT1Q8WUD6 406 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 PHYHIPQ92561 330 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 LRR1Q96L50 414 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 PGLYRP2Q96PD5 576 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 WRAP53Q9BUR4 548 aaKnown RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 CLEC7AQ9BXN2 247 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 EGLN1Q9GZT9 426 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 WDR13Q9H1Z4 485 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 MED20Q9H944 212 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 SDF2L1Q9HCN8 221 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 LHX3Q9UBR4 397 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 BCAP29Q9UHQ4 241 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF490Q9ULM2 529 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 MGAT4BQ9UQ53 548 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 ANGPTL3Q9Y5C1 460 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 CSNK1G3Q9Y6M4 447 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 RNF215Q9Y6U7 377 aa4.55□□□□□ -1.68
HMGB1P46-201ENST00000520062 A0A087WZY1 265 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 SH3PXD2BA1X283 911 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 ERVV-2B6SEH9 535 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 ANGPT2O15123 496 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 ADAM12O43184 909 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 BUB1O43683 1085 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 MAGEC1O60732 1142 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 SCGB2A1O75556 95 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 NXPH2O95156 264 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 AK1P00568 194 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 FCER2P06734 321 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 CRYBA2P53672 197 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 GCKRQ14397 625 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 MTF1Q14872 753 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 WLSQ5T9L3 541 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 GALNT17Q6IS24 598 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 PWWP2BQ6NUJ5 590 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF730Q6ZMV8 503 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 MEX3BQ6ZN04 569 aaKnown RBP4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 AMZ2Q86W34 360 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 LIPHQ8WWY8 451 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 FCGR1BQ92637 280 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 SLCO2A1Q92959 643 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 GPA33Q99795 319 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 FICDQ9BVA6 458 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 VAT1LQ9HCJ6 419 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 SCN5AQ14524 2016 aa4.54□□□□□ -1.68
HMGB1P46-201ENST00000520062 A0A1B0GWJ7 208 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 FAM230AA0A1W2PPH8 454 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 GLTPD2A6NH11 291 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms