RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 GSG1Q2KHT4 349 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CRTC2Q53ET0 693 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SIRPB2Q5JXA9 342 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 METTL11BQ5VVY1 283 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HIST2H2AA3Q6FI13 130 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GTF2H2CQ6P1K8 395 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ALKAL2Q6UX46 152 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 NKAPQ8N5F7 415 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 TRAPPC12Q8WVT3 735 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 C1GALT1C1Q96EU7 318 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HIST1H2AHQ96KK5 128 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HIST1H2AJQ99878 128 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 DUSP16Q9BY84 665 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 METTL17Q9H7H0 456 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 OR6C65A6NJZ3 312 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ANXA2P2A6NMY6 339 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GABRR3A8MPY1 467 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 A8MVJ9 347 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 PRRG1O14668 218 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CASKO14936 926 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SUV39H1O43463 412 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GPX2P18283 190 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CALCRP30988 508 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 RPS14P62263 151 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 DEFA5Q01523 94 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SERTAD2Q14140 314 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 TCTE1Q5JU00 501 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SFRP5Q5T4F7 317 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SEZ6L2Q6UXD5 910 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 RAB11FIP2Q7L804 512 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 KRT74Q7RTS7 529 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 WDR53Q7Z5U6 358 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 FAM9CQ8IZT9 166 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF454Q8N9F8 522 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 OR13C4Q8NGS5 318 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SCARB1Q8WTV0 552 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 KCNJ9Q92806 393 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 RFT1Q96AA3 541 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 THAP7Q9BT49 309 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 OSER1Q9NX31 292 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ARL5AQ9Y689 179 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 RAB19A4D1S5 217 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 D6RAR5 112 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 STK25O00506 426 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 KDM4BO94953 1096 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 IFNA4P05014 189 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 MMP2P08253 660 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 DRD2P14416 443 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ELK1P19419 428 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 C4BPBP20851 252 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 IRS1P35568 1242 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 KCNJ5P48544 419 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 DGKEP52429 567 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 CRISP1P54107 249 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 MAXP61244 160 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 FABP5Q01469 135 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.348e-35■■■■■ 42
PABPC1-208ENST00000519004 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 RAET1GQ6H3X3 334 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 FGD2Q7Z6J4 655 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 MRPL10Q7Z7H8 261 aaKnown RBP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SYNPOQ8N3V7 929 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SPPL2AQ8TCT8 520 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 HASPINQ8TF76 798 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SFT2D1Q8WV19 159 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 KCTD13Q8WZ19 329 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ELMOD3Q96FG2 381 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 DNTTIP1Q9H147 329 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 DLGAP4Q9Y2H0 992 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 LTBP4Q8N2S1 1624 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 PLSCR5A0PG75 271 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 OTCP00480 354 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 RLN2P04090 185 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ALDOBP05062 364 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ATXN1LP0C7T5 689 aaKnown RBP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SDHBP21912 280 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 AHCYP23526 432 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ATP5A1P25705 553 aaKnown RBP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms